RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 STK38LQ9Y2H1 464 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 KDM3AQ9Y4C1 1321 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 KRT13P13646 458 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 DYNC1I2Q13409 638 aaKnown RBP13.35□□□□□ -0.27
TRERF1-202ENST00000354325 APBB1IPQ7Z5R6 666 aaPredicted RBP13.35□□□□□ -0.27
TRERF1-202ENST00000354325 FAM133AQ8N9E0 248 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 METTL14Q9HCE5 456 aaKnown RBP13.35□□□□□ -0.27
TRERF1-202ENST00000354325 CTNNAL1Q9UBT7 734 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 AMACRQ9UHK6 382 aa13.35□□□□□ -0.27
TRERF1-202ENST00000354325 LAMB4A4D0S4 1761 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 hCG_1984214I3L0E3 225 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
TRERF1-202ENST00000354325 PECAM1P16284 738 aaPredicted RBP13.34□□□□□ -0.27
TRERF1-202ENST00000354325 LMNB1P20700 586 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 MMP13P45452 471 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 BLMHQ13867 455 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 DDB1Q16531 1140 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 FAM228AQ86W67 206 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 LRRC34Q8IZ02 419 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 ZNF713Q8N859 430 aaPredicted RBP13.34□□□□□ -0.27
TRERF1-202ENST00000354325 ZNF483Q8TF39 744 aaPredicted RBP13.34□□□□□ -0.27
TRERF1-202ENST00000354325 OSBPL1AQ9BXW6 950 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 CCNHP51946 323 aaPredicted RBP13.34□□□□□ -0.27
TRERF1-202ENST00000354325 CALCRLQ16602 461 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 AGGF1Q8N302 714 aaeCLIP13.34□□□□□ -0.27
TRERF1-202ENST00000354325 FAM210AQ96ND0 272 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 PAIP2Q9BPZ3 127 aaKnown RBP13.34□□□□□ -0.27
TRERF1-202ENST00000354325 MKNK2Q9HBH9 465 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 CAMTA1Q9Y6Y1 1673 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 PP2D1A8MPX8 630 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 TECP42680 631 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 MSH2P43246 934 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 DRG2P55039 364 aaKnown RBP13.34□□□□□ -0.27
TRERF1-202ENST00000354325 NPY5RQ15761 445 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 ARHGEF18Q6ZSZ5 1173 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 VSIG1Q86XK7 387 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 ZNF444Q8N0Y2 327 aaPredicted RBP13.34□□□□□ -0.27
TRERF1-202ENST00000354325 TRIM31Q9BZY9 425 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 YIPF3Q9GZM5 350 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 PCDHA6Q9UN73 950 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 PCDHA8Q9Y5H6 950 aa13.34□□□□□ -0.27
TRERF1-202ENST00000354325 SPDYE3A6NKU9 549 aa13.33□□□□□ -0.27
TRERF1-202ENST00000354325 OPLAHO14841 1288 aa13.33□□□□□ -0.27
TRERF1-202ENST00000354325 SLC26A4O43511 780 aa13.33□□□□□ -0.27
TRERF1-202ENST00000354325 GGPS1O95749 300 aa13.33□□□□□ -0.27
TRERF1-202ENST00000354325 UAP1Q16222 522 aaPredicted RBP13.33□□□□□ -0.27
TRERF1-202ENST00000354325 SEL1L2Q5TEA6 688 aa13.33□□□□□ -0.27
TRERF1-202ENST00000354325 PPP1R21Q6ZMI0 780 aa13.33□□□□□ -0.27
TRERF1-202ENST00000354325 AGAP11Q8TF27 550 aa13.33□□□□□ -0.27
TRERF1-202ENST00000354325 ERP44Q9BS26 406 aa13.33□□□□□ -0.27
TRERF1-202ENST00000354325 TTC7AQ9ULT0 858 aaPredicted RBP13.33□□□□□ -0.27
TRERF1-202ENST00000354325 PACSIN2Q9UNF0 486 aaPredicted RBP13.33□□□□□ -0.27
TRERF1-202ENST00000354325 SMIM23A6NLE4 172 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 USP17L12C9JPN9 530 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 USP17L21D6R901 530 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 IGF2BP3O00425 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRERF1-202ENST00000354325 MPHOSPH10O00566 681 aaKnown RBP13.33□□□□□ -0.28
TRERF1-202ENST00000354325 CNGA1P29973 690 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 HGSNATQ68CP4 663 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 DYMQ7RTS9 669 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 DNAJC10Q8IXB1 793 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 PNMA1Q8ND90 353 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 SNX29Q8TEQ0 813 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 TMEM109Q9BVC6 243 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 BARHL2Q9NY43 387 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 RGPD2P0DJD1 1756 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 WNT7AO00755 349 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 HNRNPCL1O60812 293 aaKnown RBP13.33□□□□□ -0.28
TRERF1-202ENST00000354325 FESP07332 822 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 CHRNA3P32297 505 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 CCDC6Q16204 474 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 MIS18BP1Q6P0N0 1132 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 RASGEF1CQ8N431 466 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 METTL13Q8N6R0 699 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 PPFIBP2Q8ND30 876 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 MXD3Q9BW11 206 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 AZI2Q9H6S1 392 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.28
TRERF1-202ENST00000354325 ECM29Q5VYK3 1845 aa13.33□□□□□ -0.28
TRERF1-202ENST00000354325 A0A087X0T9 212 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 TTI1O43156 1089 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 SMNDC1O75940 238 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRERF1-202ENST00000354325 FAM228BP0C875 321 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 SPATA21Q7Z572 469 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 DDX42Q86XP3 938 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRERF1-202ENST00000354325 NKX2-3Q8TAU0 364 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 GPKOWQ92917 476 aaPredicted RBP eCLIP13.32□□□□□ -0.28
TRERF1-202ENST00000354325 NAF1Q96HR8 494 aaKnown RBP13.32□□□□□ -0.28
TRERF1-202ENST00000354325 CNOT8Q9UFF9 292 aaKnown RBP13.32□□□□□ -0.28
TRERF1-202ENST00000354325 HDAC9Q9UKV0 1011 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 SYNGAP1Q96PV0 1343 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 MIF4GDA9UHW6 222 aaKnown RBP13.32□□□□□ -0.28
TRERF1-202ENST00000354325 CALUO43852 315 aaPredicted RBP13.32□□□□□ -0.28
TRERF1-202ENST00000354325 FGGP02679 453 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 FGRP09769 529 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 STX2P32856 288 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 TXKP42681 527 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 GRM4Q14833 912 aa13.32□□□□□ -0.28
TRERF1-202ENST00000354325 ACCSLQ4AC99 568 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms