RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SUN1O94901 812 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 PYGMP11217 842 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 MLH1P40692 756 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 MMP13P45452 471 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 RTP1P59025 263 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 NLRP5P59047 1200 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 KSR2Q6VAB6 950 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 TMC3Q7Z5M5 1100 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 ZNF507Q8TCN5 953 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 SCG3Q8WXD2 468 aaKnown RBP11.55□□□□□ -0.56
CAPN3-203ENST00000349748 LENG1Q96BZ8 264 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-203ENST00000349748 RAB3IPQ96QF0 476 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-203ENST00000349748 HAPLN3Q96S86 360 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 ATP8A1Q9Y2Q0 1164 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 ZNF711Q9Y462 761 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 AFPP02771 609 aaKnown RBP11.55□□□□□ -0.56
CAPN3-203ENST00000349748 PDE6CP51160 858 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 KIF11P52732 1056 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 PTPROQ16827 1216 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 SLC4A8Q2Y0W8 1093 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 NRG4Q8WWG1 115 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 GATA6Q92908 595 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 ZNF653Q96CK0 615 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 DYDC2Q96IM9 177 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 SRPK1Q96SB4 655 aaKnown RBP11.55□□□□□ -0.56
CAPN3-203ENST00000349748 TTYH3Q9C0H2 523 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 MLXIPLQ9NP71 852 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 DDX21Q9NR30 783 aaKnown RBP eCLIP11.55□□□□□ -0.56
CAPN3-203ENST00000349748 ARHGAP20Q9P2F6 1191 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 RWDD2AQ9UIY3 292 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 KCNJ14Q9UNX9 436 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 GDAQ9Y2T3 454 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 MAP3K15Q6ZN16 1313 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 UNC5CO95185 931 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 MYBP10242 640 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 EIF4A3P38919 411 aaKnown RBP11.55□□□□□ -0.56
CAPN3-203ENST00000349748 ANTXR2P58335 489 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 PHEXP78562 749 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 AIMP1Q12904 312 aaKnown RBP11.55□□□□□ -0.56
CAPN3-203ENST00000349748 TRIM29Q14134 588 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 ZNF554Q86TJ5 538 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 C2CD5Q86YS7 1000 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 NOSTRINQ8IVI9 506 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 SCUBE1Q8IWY4 988 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 GSDMAQ96QA5 445 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 AZI2Q9H6S1 392 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 RXFP1Q9HBX9 757 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 TDRKHQ9Y2W6 561 aaKnown RBP11.55□□□□□ -0.56
CAPN3-203ENST00000349748 SLC4A7Q9Y6M7 1214 aa11.55□□□□□ -0.56
CAPN3-203ENST00000349748 LAMA4Q16363 1823 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 GRM8O00222 908 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 AKR1B10O60218 316 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 SKIP12755 728 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 CCNB1P14635 433 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 EHHADHQ08426 723 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 MGAT5Q09328 741 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 SLC44A4Q53GD3 710 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 SNX30Q5VWJ9 437 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 IFNL2Q8IZJ0 200 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 ENDOVQ8N8Q3 282 aaKnown RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 AP1M1Q9BXS5 423 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 DENND2DQ9H6A0 471 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 PDP2Q9P2J9 529 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 DENND2AQ9ULE3 1009 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 ANGEL1Q9UNK9 670 aaKnown RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 EFR3BQ9Y2G0 817 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 USP54Q70EL1 1684 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 LRP6O75581 1613 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 RNMTO43148 476 aaKnown RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 PHKG2P15735 406 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 VCAM1P19320 739 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 TARSP26639 723 aaKnown RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 PMS1P54277 932 aaKnown RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 TNNC1P63316 161 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 HPCAP84074 193 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 MTMR3Q13615 1198 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 TTLL12Q14166 644 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 CCDC6Q16204 474 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 UHMK1Q8TAS1 419 aaKnown RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 LRRC8CQ8TDW0 803 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 DHTKD1Q96HY7 919 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 NR1H4Q96RI1 486 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-203ENST00000349748 PFDN4Q9NQP4 134 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 USP21Q9UK80 565 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 COMMD3-BMI1R4GMX3 469 aa11.54□□□□□ -0.56
CAPN3-203ENST00000349748 A0A1W2PQC6 194 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 TMEM247A6NEH6 219 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 PALMO75781 387 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 EPHB2P29323 1055 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 SERPINB3P29508 390 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 MAGEA1P43355 309 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 GALK1P51570 392 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 NR5A1Q13285 461 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 CUL1Q13616 776 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 WASHC4Q2M389 1173 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 LIN52Q52LA3 116 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms