RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 KIAA0753Q2KHM9 967 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 SLC9C1Q4G0N8 1177 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 FAM133BQ5BKY9 247 aaKnown RBP20.35■□□□□ 0.85
SCARF1-202ENST00000348987 ERMARDQ5T6L9 678 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 AGAP11Q8TF27 550 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 TBC1D5Q92609 795 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 TAF4BQ92750 862 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 DDX47Q9H0S4 455 aaKnown RBP20.35■□□□□ 0.85
SCARF1-202ENST00000348987 SLC12A4Q9UP95 1085 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 SART1O43290 800 aaKnown RBP20.35■□□□□ 0.85
SCARF1-202ENST00000348987 DAPK3O43293 454 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 GRAPQ13588 217 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 NONOQ15233 471 aaKnown RBP eCLIP20.35■□□□□ 0.85
SCARF1-202ENST00000348987 GALNT17Q6IS24 598 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 ANKS4BQ8N8V4 417 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 EIF1ADQ8N9N8 165 aaKnown RBP20.35■□□□□ 0.85
SCARF1-202ENST00000348987 GRAPLQ8TC17 118 aaPredicted RBP20.35■□□□□ 0.85
SCARF1-202ENST00000348987 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.35■□□□□ 0.85
SCARF1-202ENST00000348987 TANGO6Q9C0B7 1094 aa20.35■□□□□ 0.85
SCARF1-202ENST00000348987 TNRC6CQ9HCJ0 1690 aaKnown RBP20.35■□□□□ 0.85
SCARF1-202ENST00000348987 USP17L5A8MUK1 530 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 TXKP42681 527 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 ARID5AQ03989 594 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 SEMA3FQ13275 785 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 CENPPQ6IPU0 288 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 SPZ1Q9BXG8 430 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 SPATS2LQ9NUQ6 558 aaKnown RBP20.34■□□□□ 0.85
SCARF1-202ENST00000348987 CEP104O60308 925 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 GPSM2P81274 684 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 NEK8Q86SG6 692 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 CLEC10AQ8IUN9 316 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 ZNF570Q96NI8 536 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 PNMA2Q9UL42 364 aa20.34■□□□□ 0.85
SCARF1-202ENST00000348987 LAD1O00515 517 aa20.33■□□□□ 0.85
SCARF1-202ENST00000348987 KCNMA1Q12791 1236 aa20.33■□□□□ 0.85
SCARF1-202ENST00000348987 MTMR3Q13615 1198 aa20.33■□□□□ 0.85
SCARF1-202ENST00000348987 RPS6KA1Q15418 735 aa20.33■□□□□ 0.85
SCARF1-202ENST00000348987 CDCA2Q69YH5 1023 aaPredicted RBP20.33■□□□□ 0.85
SCARF1-202ENST00000348987 PRR5LQ6MZQ0 368 aa20.33■□□□□ 0.85
SCARF1-202ENST00000348987 SCFD2Q8WU76 684 aa20.33■□□□□ 0.85
SCARF1-202ENST00000348987 GJD4Q96KN9 370 aaPredicted RBP20.33■□□□□ 0.85
SCARF1-202ENST00000348987 FAM129AQ9BZQ8 928 aa20.33■□□□□ 0.85
SCARF1-202ENST00000348987 FRMPD2Q68DX3 1309 aaPredicted RBP20.33■□□□□ 0.85
SCARF1-202ENST00000348987 ENO4A6NNW6 628 aa20.33■□□□□ 0.84
SCARF1-202ENST00000348987 DHX9Q08211 1270 aaKnown RBP20.33■□□□□ 0.84
SCARF1-202ENST00000348987 RIPK1Q13546 671 aa20.33■□□□□ 0.84
SCARF1-202ENST00000348987 TMC3Q7Z5M5 1100 aa20.33■□□□□ 0.84
SCARF1-202ENST00000348987 ZNF317Q96PQ6 595 aaPredicted RBP20.33■□□□□ 0.84
SCARF1-202ENST00000348987 ADAMTS1Q9UHI8 967 aa20.33■□□□□ 0.84
SCARF1-202ENST00000348987 AMACRQ9UHK6 382 aa20.33■□□□□ 0.84
SCARF1-202ENST00000348987 A0A087X0T9 212 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 EDIL3O43854 480 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 DIAPH2O60879 1101 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 FAM228BP0C875 321 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 GSTO1P78417 241 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 SFMBT2Q5VUG0 894 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 CAPRIN2Q6IMN6 1127 aaKnown RBP20.32■□□□□ 0.84
SCARF1-202ENST00000348987 CNNM4Q6P4Q7 775 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 C16orf86Q6ZW13 317 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 MICAL1Q8TDZ2 1067 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 L3MBTL3Q96JM7 780 aaPredicted RBP20.32■□□□□ 0.84
SCARF1-202ENST00000348987 C7orf25Q9BPX7 421 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 CD209Q9NNX6 404 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.32■□□□□ 0.84
SCARF1-202ENST00000348987 MAST2Q6P0Q8 1798 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 SERPING1P05155 500 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 CHN1P15882 459 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 EIF6P56537 245 aaKnown RBP20.32■□□□□ 0.84
SCARF1-202ENST00000348987 KRT25Q7Z3Z0 450 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 ZNF804AQ7Z570 1209 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 NEDD1Q8NHV4 660 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 COA7Q96BR5 231 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 SAAL1Q96ER3 474 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 C6orf50Q9HD87 102 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 LUC7LQ9NQ29 371 aaKnown RBP20.32■□□□□ 0.84
SCARF1-202ENST00000348987 AGAP1Q9UPQ3 857 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 MYH7BA7E2Y1 1941 aa20.32■□□□□ 0.84
SCARF1-202ENST00000348987 F8VZ95 297 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 SLC37A4O43826 429 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 CAND2O75155 1236 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 MAP2K1Q02750 393 aaPredicted RBP20.31■□□□□ 0.84
SCARF1-202ENST00000348987 DYMQ7RTS9 669 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 SEPT12Q8IYM1 358 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 AK8Q96MA6 479 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 NUDT12Q9BQG2 462 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 CNOT10Q9H9A5 744 aaKnown RBP20.31■□□□□ 0.84
SCARF1-202ENST00000348987 UFL1O94874 794 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 MMEP08473 750 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 RHBDL3P58872 404 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 SLC18A3Q16572 532 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 FAM83BQ5T0W9 1011 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 GLIS3Q8NEA6 775 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 GJA10Q969M2 543 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 ELAC2Q9BQ52 826 aaKnown RBP20.31■□□□□ 0.84
SCARF1-202ENST00000348987 BLOC1S4Q9NUP1 217 aa20.31■□□□□ 0.84
SCARF1-202ENST00000348987 POTEMA6NI47 508 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 RGL2O15211 777 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 TDP2O95551 362 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 GSTA1P08263 222 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 PPP1R2P41236 205 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms