RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 DNM3Q9UQ16 869 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 CACNA1CQ13936 2221 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 CDKL2Q92772 493 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 PAWRQ96IZ0 340 aaKnown RBP14.61□□□□□ -0.07
TRIO-202ENST00000344204 PYGBP11216 843 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 ATP6V1B1P15313 513 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 NSFP46459 744 aaKnown RBP14.61□□□□□ -0.07
TRIO-202ENST00000344204 AP4S1Q9Y587 144 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 hCG_1642624A0A1W2PR95 340 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 ATF3P18847 181 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 HOXA7P31268 230 aaPredicted RBP14.6□□□□□ -0.07
TRIO-202ENST00000344204 ARFIP2P53365 341 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 EPHB1P54762 984 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 ZIM3Q96PE6 472 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 PSMD14O00487 310 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 HLA-DOAP06340 250 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 PITPNM2Q9BZ72 1349 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 ZC3H15Q8WU90 426 aaKnown RBP14.6□□□□□ -0.07
TRIO-202ENST00000344204 TRIM11Q96F44 468 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 CHD2O14647 1828 aaKnown RBP14.6□□□□□ -0.07
TRIO-202ENST00000344204 TRIP13Q15645 432 aaPredicted RBP14.6□□□□□ -0.07
TRIO-202ENST00000344204 RABGAP1LQ5R372 815 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 ZNF654Q8IZM8 581 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 ARHGEF10O15013 1369 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 NUP214P35658 2090 aaPredicted RBP14.6□□□□□ -0.07
TRIO-202ENST00000344204 UNC5CLQ8IV45 518 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 TMEM165Q9HC07 324 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 SNX5Q9Y5X3 404 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 TOM1O60784 492 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 NONOQ15233 471 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRIO-202ENST00000344204 RFX8Q6ZV50 586 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 COL4A3BPQ9Y5P4 624 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 STAM2O75886 525 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 PANK4Q9NVE7 773 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 PTPRTO14522 1441 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 LSM1O15116 133 aaKnown RBP14.6□□□□□ -0.07
TRIO-202ENST00000344204 PDE6AP16499 860 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 DAB2P98082 770 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 CCDC125Q86Z20 511 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 HAUS7Q99871 368 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 SNX24Q9Y343 169 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 BTBD18B2RXH4 712 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 PRR29P0C7W0 189 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 STX1BP61266 288 aa14.6□□□□□ -0.07
TRIO-202ENST00000344204 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.6□□□□□ -0.07
TRIO-202ENST00000344204 DNAL1Q4LDG9 190 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 ATXN10Q9UBB4 475 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 GSTA4O15217 222 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 ZNF185O15231 689 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 BLVRAP53004 296 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 GRIN1Q05586 938 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 LRRC14Q15048 493 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 COPS6Q7L5N1 327 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 ADCK1Q86TW2 530 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 MIGA1Q8NAN2 632 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 FAM96AQ9H5X1 160 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 R3HDM2Q9Y2K5 976 aaKnown RBP14.59□□□□□ -0.07
TRIO-202ENST00000344204 NLRP1Q9C000 1473 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 MRPL12P52815 198 aaKnown RBP14.59□□□□□ -0.07
TRIO-202ENST00000344204 MTTPP55157 894 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 TAF5LO75529 589 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 SASH3O75995 380 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 OR52Z1P0C646 297 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 BRAFP15056 766 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 AARSP49588 968 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRIO-202ENST00000344204 DNAJC17Q9NVM6 304 aaKnown RBP14.59□□□□□ -0.07
TRIO-202ENST00000344204 TRAPPC10P48553 1259 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 CYP2J2P51589 502 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 MYCT1Q8N699 235 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 DCLRE1BQ9H816 532 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 NPATQ14207 1427 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 GNGT2O14610 69 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 ADARP55265 1226 aaKnown RBP14.59□□□□□ -0.07
TRIO-202ENST00000344204 FNBP1Q96RU3 617 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 CAPN1P07384 714 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 ZCCHC18P0CG32 403 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 YY1P25490 414 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 HIC1Q14526 733 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 RSPH3Q86UC2 560 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 PKD2L2Q9NZM6 624 aa14.59□□□□□ -0.07
TRIO-202ENST00000344204 CCDC195A0A1B0GUA6 201 aa14.58□□□□□ -0.07
TRIO-202ENST00000344204 ESYT2A0FGR8 921 aa14.58□□□□□ -0.07
TRIO-202ENST00000344204 GSTT1P30711 240 aa14.58□□□□□ -0.07
TRIO-202ENST00000344204 HORMAD1Q86X24 394 aa14.58□□□□□ -0.07
TRIO-202ENST00000344204 DACH2Q96NX9 599 aa14.58□□□□□ -0.07
TRIO-202ENST00000344204 FAM187AA6NFU0 413 aa14.58□□□□□ -0.07
TRIO-202ENST00000344204 YTHDF3Q7Z739 585 aaKnown RBP14.58□□□□□ -0.07
TRIO-202ENST00000344204 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.58□□□□□ -0.07
TRIO-202ENST00000344204 NMD3Q96D46 503 aaKnown RBP14.58□□□□□ -0.07
TRIO-202ENST00000344204 CFAP36Q96G28 342 aa14.58□□□□□ -0.07
TRIO-202ENST00000344204 DBNDD2Q9BQY9 259 aa14.58□□□□□ -0.07
TRIO-202ENST00000344204 NPHS2Q9NP85 383 aa14.58□□□□□ -0.07
TRIO-202ENST00000344204 SAYSD1Q9NPB0 183 aa14.58□□□□□ -0.07
TRIO-202ENST00000344204 USP33Q8TEY7 942 aa14.58□□□□□ -0.08
TRIO-202ENST00000344204 SENP1Q9P0U3 644 aa14.58□□□□□ -0.08
TRIO-202ENST00000344204 NDUFB9Q9Y6M9 179 aa14.58□□□□□ -0.08
TRIO-202ENST00000344204 ADGRL2O95490 1459 aa14.58□□□□□ -0.08
TRIO-202ENST00000344204 LAD1O00515 517 aa14.58□□□□□ -0.08
TRIO-202ENST00000344204 SEPT8Q92599 483 aa14.58□□□□□ -0.08
TRIO-202ENST00000344204 CAPN9O14815 690 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms