RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 MTG1Q9BT17 334 aaPredicted RBP15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 WDR11Q9BZH6 1224 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 ANO10Q9NW15 660 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 KIAA1468Q9P260 1216 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 ADD3Q9UEY8 706 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 CCPG1Q9ULG6 757 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 LPXNO60711 386 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 MYL3P08590 195 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 LONP1P36776 959 aaKnown RBP15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 CLK2P49760 499 aaKnown RBP15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 ZRSR1Q15695 479 aaKnown RBP15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 NBPF20Q3BBV1 942 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 ANO6Q4KMQ2 910 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 KANK3Q6NY19 840 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 NFRKBQ6P4R8 1299 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 HERC6Q8IVU3 1022 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 HLA-CQ95604 372 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 PPP1R9BQ96SB3 815 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 AMNQ9BXJ7 453 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 RANBP17Q9H2T7 1088 aaKnown RBP15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 USP25Q9UHP3 1055 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 HCN4Q9Y3Q4 1203 aa15.17■□□□□ 0.02
HERPUD1-202ENST00000344114 GPR37L1O60883 481 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 BAIAP3O94812 1187 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 PTPN11Q06124 597 aaPredicted RBP15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 GRB10Q13322 594 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 BAATQ14032 418 aaPredicted RBP15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 TMEM31Q5JXX7 168 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 JAKMIP3Q5VZ66 844 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 FBXO11Q86XK2 927 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 C4orf32Q8N8J7 132 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 CNNM3Q8NE01 707 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 OR6J1Q8NGC5 347 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 TBCKQ8TEA7 893 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 ARNTL2Q8WYA1 636 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 NAP1L4Q99733 375 aaKnown RBP15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 KIAA1217Q5T5P2 1943 aa15.16■□□□□ 0.02
HERPUD1-202ENST00000344114 SIP14410 1827 aa15.15■□□□□ 0.02
HERPUD1-202ENST00000344114 VWA3AA6NCI4 1184 aa15.15■□□□□ 0.02
HERPUD1-202ENST00000344114 NFIBO00712 420 aa15.15■□□□□ 0.02
HERPUD1-202ENST00000344114 NKRFO15226 690 aaKnown RBP eCLIP15.15■□□□□ 0.02
HERPUD1-202ENST00000344114 SPECC1Q5M775 1068 aa15.15■□□□□ 0.02
HERPUD1-202ENST00000344114 KHSRPQ92945 711 aaKnown RBP eCLIP15.15■□□□□ 0.022e-11■■□□□ 13.5
HERPUD1-202ENST00000344114 C11orf16Q9NQ32 467 aa15.15■□□□□ 0.02
HERPUD1-202ENST00000344114 PCDHA1Q9Y5I3 950 aa15.15■□□□□ 0.02
HERPUD1-202ENST00000344114 A6NJR5 290 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 NEMFO60524 1076 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 KPNA6O60684 536 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 TXLNAP40222 546 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 AP3B2Q13367 1082 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 BFSP2Q13515 415 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 LETM2Q2VYF4 491 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 FAM47CQ5HY64 1035 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 SPRED2Q7Z698 418 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 CEP57L1Q8IYX8 460 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 RETREG2Q8NC44 543 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 PDLIM2Q96JY6 352 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 DNAJC25Q9H1X3 360 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 PSTPIP2Q9H939 334 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 LMCD1Q9NZU5 365 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 TUBE1Q9UJT0 475 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 MYH11P35749 1972 aa15.14■□□□□ 0.01
HERPUD1-202ENST00000344114 ACTN4O43707 911 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 CCNT1O60563 726 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 OR52Z1P0C646 297 aa15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 GCFC2P16383 781 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 EDNRBP24530 442 aa15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 ZNF165P49910 485 aa15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 NLRP12P59046 1061 aa15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 LONRF3Q496Y0 759 aa15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 BRDTQ58F21 947 aaPredicted RBP15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 DTHD1Q6ZMT9 781 aa15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 PPP1R13LQ8WUF5 828 aa15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 AK8Q96MA6 479 aa15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 NAT10Q9H0A0 1025 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 CBX8Q9HC52 389 aa15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 TMEM260Q9NX78 707 aa15.13■□□□□ 0.01
HERPUD1-202ENST00000344114 WDR5P61964 334 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-202ENST00000344114 POSTNQ15063 836 aa15.12■□□□□ 0.01
HERPUD1-202ENST00000344114 UBE2SQ16763 222 aa15.12■□□□□ 0.01
HERPUD1-202ENST00000344114 SLC30A10Q6XR72 485 aa15.12■□□□□ 0.01
HERPUD1-202ENST00000344114 CLEC4DQ8WXI8 215 aa15.12■□□□□ 0.01
HERPUD1-202ENST00000344114 EPSTI1Q96J88 318 aa15.12■□□□□ 0.01
HERPUD1-202ENST00000344114 BPIFA3Q9BQP9 254 aa15.12■□□□□ 0.01
HERPUD1-202ENST00000344114 SERTAD1Q9UHV2 236 aa15.12■□□□□ 0.01
HERPUD1-202ENST00000344114 LCHNA4D1U4 455 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 PI4K2BG5E9Z4 385 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 FOSP01100 380 aaPredicted RBP15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 PNOCQ13519 176 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 GPNMBQ14956 572 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 IL17AQ16552 155 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 PPP4R3AQ6IN85 833 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 C11orf57Q6ZUT1 292 aaPredicted RBP15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 USP49Q70CQ1 688 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 DNERQ8NFT8 737 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 CAGE1Q8TC20 777 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 AFAP1L1Q8TED9 768 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 SCFD2Q8WU76 684 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms