RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
RPL28-201ENST00000344063 CLIC2O15247 247 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 ACSL3O95573 720 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 PPP2R2AP63151 447 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 ANKRD40Q6AI12 368 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 CAPRIN2Q6IMN6 1127 aaKnown RBP11.79□□□□□ -0.52
RPL28-201ENST00000344063 CYP4F22Q6NT55 531 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 BBOF1Q8ND07 529 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 RAB3IL1Q8TBN0 382 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 MAK16Q9BXY0 300 aaKnown RBP11.79□□□□□ -0.52
RPL28-201ENST00000344063 CPVLQ9H3G5 476 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 SLC40A1Q9NP59 571 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
RPL28-201ENST00000344063 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 ZBED4O75132 1171 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 SKAP2O75563 359 aaPredicted RBP11.79□□□□□ -0.52
RPL28-201ENST00000344063 MAN1A1P33908 653 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 COASYQ13057 564 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 DLGAP5Q15398 846 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 NLRX1Q86UT6 975 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 CFAP61Q8NHU2 1237 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 HPS3Q969F9 1004 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 C1orf112Q9NSG2 853 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 RBM12Q9NTZ6 932 aaKnown RBP11.79□□□□□ -0.52
RPL28-201ENST00000344063 USP21Q9UK80 565 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 FBXL5Q9UKA1 691 aa11.79□□□□□ -0.52
RPL28-201ENST00000344063 GRID2IPA4D2P6 1211 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 USP17L5A8MUK1 530 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 FGGP02679 453 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 TRPC3Q13507 836 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 TRIP13Q15645 432 aaPredicted RBP11.78□□□□□ -0.52
RPL28-201ENST00000344063 NTRK3Q16288 839 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 CDC37Q16543 378 aaPredicted RBP11.78□□□□□ -0.52
RPL28-201ENST00000344063 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 ARMC2Q8NEN0 867 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 P3H4Q92791 437 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 PSMD1Q99460 953 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 PARVGQ9HBI0 331 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 CNTNAP5Q8WYK1 1306 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 MEIS1O00470 390 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 PSMD14O00487 310 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 RASGRF2O14827 1237 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 SERPINB2P05120 415 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 TNNI1P19237 187 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 HSPA1LP34931 641 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 KLK7P49862 253 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 SF3B3Q15393 1217 aaKnown RBP11.78□□□□□ -0.52
RPL28-201ENST00000344063 CEP95Q96GE4 821 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 ZMYND12Q9H0C1 365 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 NWD1Q149M9 1564 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 KDM6AO15550 1401 aaPredicted RBP11.78□□□□□ -0.52
RPL28-201ENST00000344063 ZBTB5O15062 677 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 DIAPH2O60879 1101 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 FAM196AQ6ZSG2 479 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 GIMAP8Q8ND71 665 aaPredicted RBP11.78□□□□□ -0.52
RPL28-201ENST00000344063 C7orf25Q9BPX7 421 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 DMGDHQ9UI17 866 aaKnown RBP11.78□□□□□ -0.52
RPL28-201ENST00000344063 H0YCG3 227 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 LRRN2O75325 713 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 FCER1AP12319 257 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 MFAP3P55082 362 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 SLC20A2Q08357 652 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 ILDR1Q86SU0 546 aaPredicted RBP11.78□□□□□ -0.52
RPL28-201ENST00000344063 SLC17A8Q8NDX2 589 aa11.78□□□□□ -0.52
RPL28-201ENST00000344063 PPEF1O14829 653 aaPredicted RBP11.77□□□□□ -0.52
RPL28-201ENST00000344063 BMP3P12645 472 aa11.77□□□□□ -0.52
RPL28-201ENST00000344063 KCNQ4P56696 695 aa11.77□□□□□ -0.52
RPL28-201ENST00000344063 TROAPQ12815 778 aa11.77□□□□□ -0.52
RPL28-201ENST00000344063 XKR9Q5GH70 373 aa11.77□□□□□ -0.52
RPL28-201ENST00000344063 PDXDC1Q6P996 788 aa11.77□□□□□ -0.52
RPL28-201ENST00000344063 DDX42Q86XP3 938 aaKnown RBP eCLIP11.77□□□□□ -0.52
RPL28-201ENST00000344063 PRPF38AQ8NAV1 312 aaKnown RBP11.77□□□□□ -0.52
RPL28-201ENST00000344063 DDX23Q9BUQ8 820 aaKnown RBP11.77□□□□□ -0.52
RPL28-201ENST00000344063 KCND1Q9NSA2 647 aa11.77□□□□□ -0.52
RPL28-201ENST00000344063 PRPF6O94906 941 aaKnown RBP11.77□□□□□ -0.53
RPL28-201ENST00000344063 TOB1P50616 345 aaPredicted RBP11.77□□□□□ -0.53
RPL28-201ENST00000344063 KCNH2Q12809 1159 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 PDIA5Q14554 519 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 DPH6Q7L8W6 267 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 MCF2L2Q86YR7 1114 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 CCDC127Q96BQ5 260 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 NT5C1BQ96P26 610 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 BHMT2Q9H2M3 363 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 TMEM206Q9H813 350 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 YY1AP1Q9H869 796 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 PNMA2Q9UL42 364 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 DIS3Q9Y2L1 958 aaKnown RBP11.77□□□□□ -0.53
RPL28-201ENST00000344063 SSU72P8A0A1W2PR75 194 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 ARHGAP42A6NI28 874 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 DAPK3O43293 454 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 EVI5O60447 810 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 FAM102BQ5T8I3 360 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 RILPQ96NA2 401 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 AZI2Q9H6S1 392 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 CD209Q9NNX6 404 aa11.77□□□□□ -0.53
RPL28-201ENST00000344063 WDR91A4D1P6 747 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 ATF2P15336 505 aa11.76□□□□□ -0.53
RPL28-201ENST00000344063 ERFP50548 548 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms