RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 TMC3Q7Z5M5 1100 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 NBPF5PQ86XG9 351 aaPredicted RBP22.59■■□□□ 1.21
CLPB-202ENST00000340729 CCDC50Q8IVM0 306 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 SYCE1Q8N0S2 351 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 MAGEC3Q8TD91 643 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 ZKSCAN4Q969J2 545 aaPredicted RBP22.59■■□□□ 1.21
CLPB-202ENST00000340729 UBA5Q9GZZ9 404 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 FAM114A2Q9NRY5 505 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 BRWD3Q6RI45 1802 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 LOC102724159A0A0B4J2E5 919 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 SNHG28P0DPA3 235 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 UCHL3P15374 230 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 PWP2Q15269 919 aaKnown RBP22.59■■□□□ 1.21
CLPB-202ENST00000340729 ALKBH5Q6P6C2 394 aaKnown RBP22.59■■□□□ 1.21
CLPB-202ENST00000340729 CERKQ8TCT0 537 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 CNOT10Q9H9A5 744 aaKnown RBP22.59■■□□□ 1.21
CLPB-202ENST00000340729 TRAF3IP3Q9Y228 551 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 LEMD3Q9Y2U8 911 aa22.59■■□□□ 1.21
CLPB-202ENST00000340729 EIF3BP55884 814 aaKnown RBP22.58■■□□□ 1.21
CLPB-202ENST00000340729 PREPLQ4J6C6 727 aaPredicted RBP22.58■■□□□ 1.21
CLPB-202ENST00000340729 NELFCDQ8IXH7 590 aa22.58■■□□□ 1.21
CLPB-202ENST00000340729 TATDN2Q93075 761 aa22.58■■□□□ 1.21
CLPB-202ENST00000340729 COA7Q96BR5 231 aa22.58■■□□□ 1.21
CLPB-202ENST00000340729 CENPTQ96BT3 561 aa22.58■■□□□ 1.21
CLPB-202ENST00000340729 OSBPL7Q9BZF2 842 aa22.58■■□□□ 1.21
CLPB-202ENST00000340729 GPR75-ASB3A0A0A6YYF3 556 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 KRIT1O00522 736 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 CCDC172P0C7W6 258 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 PLA2G4BP0C869 781 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 PLCG2P16885 1265 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 CDR1P51861 262 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 ANKRD20A8PQ5CZ79 823 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 WLSQ5T9L3 541 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 OR2W6PQ8NHA6 318 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 SEC16BQ96JE7 1060 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 SPAG5Q96R06 1193 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 CENPHQ9H3R5 247 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 SWAP70Q9UH65 585 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 HDAC9Q9UKV0 1011 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 PCDHA12Q9UN75 941 aa22.58■■□□□ 1.2
CLPB-202ENST00000340729 C21orf2O43822 256 aa22.57■■□□□ 1.2
CLPB-202ENST00000340729 GFPT2O94808 682 aa22.57■■□□□ 1.2
CLPB-202ENST00000340729 TM4SF1P30408 202 aa22.57■■□□□ 1.2
CLPB-202ENST00000340729 RDXP35241 583 aaKnown RBP22.57■■□□□ 1.2
CLPB-202ENST00000340729 TNNI2P48788 182 aa22.57■■□□□ 1.2
CLPB-202ENST00000340729 HERC4Q5GLZ8 1057 aaPredicted RBP22.57■■□□□ 1.2
CLPB-202ENST00000340729 C15orf52Q6ZUT6 534 aaKnown RBP22.57■■□□□ 1.2
CLPB-202ENST00000340729 DDX42Q86XP3 938 aaKnown RBP eCLIP22.57■■□□□ 1.2
CLPB-202ENST00000340729 SEPT12Q8IYM1 358 aa22.57■■□□□ 1.2
CLPB-202ENST00000340729 CACNA2D3Q8IZS8 1091 aa22.57■■□□□ 1.2
CLPB-202ENST00000340729 JPH2Q9BR39 696 aaPredicted RBP22.57■■□□□ 1.2
CLPB-202ENST00000340729 DDX47Q9H0S4 455 aaKnown RBP22.57■■□□□ 1.2
CLPB-202ENST00000340729 C10orf71Q711Q0 1435 aa22.57■■□□□ 1.2
CLPB-202ENST00000340729 AFPP02771 609 aaKnown RBP22.56■■□□□ 1.2
CLPB-202ENST00000340729 GHRP10912 638 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 CYP11B2P19099 503 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 GRIK5Q16478 980 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 PEX26Q7Z412 305 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 UBLCP1Q8WVY7 318 aaPredicted RBP22.56■■□□□ 1.2
CLPB-202ENST00000340729 RAPGEF5Q92565 580 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 CCDC114Q96M63 670 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 MXD3Q9BW11 206 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 AP1M1Q9BXS5 423 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 CNOT8Q9UFF9 292 aaKnown RBP22.56■■□□□ 1.2
CLPB-202ENST00000340729 PNMA6FA0A0J9YX94 578 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 F8VZ95 297 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 NR2F2P24468 414 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 BTDP43251 543 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 POU5F1Q01860 360 aaKnown RBP22.56■■□□□ 1.2
CLPB-202ENST00000340729 VPS36Q86VN1 386 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 GPBP1Q86WP2 473 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 GPATCH11Q8N954 259 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 TLCD1Q96CP7 247 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 HES6Q96HZ4 224 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 TXLNGYQ9BZA5 131 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 TBC1D7Q9P0N9 293 aa22.56■■□□□ 1.2
CLPB-202ENST00000340729 DIS3Q9Y2L1 958 aaKnown RBP22.56■■□□□ 1.2
CLPB-202ENST00000340729 TMCO5BA8MYB1 307 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 ONECUT3O60422 494 aaPredicted RBP22.55■■□□□ 1.2
CLPB-202ENST00000340729 PPFIA2O75334 1257 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 H2AFZP0C0S5 128 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 PON1P27169 355 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 JAM2P57087 298 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 BYSLQ13895 437 aaKnown RBP22.55■■□□□ 1.2
CLPB-202ENST00000340729 PPP2R5EQ16537 467 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 QPCTQ16769 361 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 EXOC3L4Q17RC7 722 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 H2AFVQ71UI9 128 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 NT5DC3Q86UY8 548 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 KANSL2Q9H9L4 492 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 LRRC4BQ9NT99 713 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 ARMCX3Q9UH62 379 aaPredicted RBP22.55■■□□□ 1.2
CLPB-202ENST00000340729 NOVA2Q9UNW9 492 aaKnown RBP22.55■■□□□ 1.2
CLPB-202ENST00000340729 ARFGEF1Q9Y6D6 1849 aa22.55■■□□□ 1.2
CLPB-202ENST00000340729 E9PMD0 336 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 DAPK3O43293 454 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 SLC9A1P19634 815 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 FLT3P36888 993 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 NEDD9Q14511 834 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 ENOX2Q16206 610 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms