RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 CENPPQ6IPU0 288 aa21.55■■□□□ 1.04
NHLRC1-201ENST00000340650 CNNM4Q6P4Q7 775 aa21.55■■□□□ 1.04
NHLRC1-201ENST00000340650 CCDC174Q6PII3 467 aa21.55■■□□□ 1.04
NHLRC1-201ENST00000340650 SEMA6BQ9H3T3 888 aa21.55■■□□□ 1.04
NHLRC1-201ENST00000340650 EPHB6O15197 1021 aa21.54■■□□□ 1.04
NHLRC1-201ENST00000340650 MCTP2Q6DN12 878 aa21.54■■□□□ 1.04
NHLRC1-201ENST00000340650 C8orf74Q6P047 294 aa21.54■■□□□ 1.04
NHLRC1-201ENST00000340650 KIAA0895Q8NCT3 520 aa21.54■■□□□ 1.04
NHLRC1-201ENST00000340650 CTNND1O60716 968 aaKnown RBP21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 MATR3P43243 847 aaKnown RBP eCLIP21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 APBA1Q02410 837 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 APOBEC3FQ8IUX4 373 aaKnown RBP21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 ZIM3Q96PE6 472 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 TLR10Q9BXR5 811 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 NDST4Q9H3R1 872 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 SMARCAL1Q9NZC9 954 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 MEIS2O14770 477 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 AKR1B10O60218 316 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 TECP42680 631 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 MAGEA1P43355 309 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 AMPD3Q01432 767 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 ASTE1Q2TB18 679 aaPredicted RBP21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 ZKSCAN4Q969J2 545 aaPredicted RBP21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 CEP89Q96ST8 783 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 P2RX7Q99572 595 aaKnown RBP21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 RNF14Q9UBS8 474 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 TSKSQ9UJT2 592 aa21.53■■□□□ 1.04
NHLRC1-201ENST00000340650 CXCR5P32302 372 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 TXKP42681 527 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 MRPS25P82663 173 aaKnown RBP21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 CALCRLQ16602 461 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 MAN2A1Q16706 1144 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 EMC10Q5UCC4 262 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 B4GALNT4Q76KP1 1039 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 RNF10Q8N5U6 811 aaKnown RBP21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 GDF3Q9NR23 364 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 RBM12Q9NTZ6 932 aaKnown RBP21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 EHD2Q9NZN4 543 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 SALL4Q9UJQ4 1053 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 ATAD5Q96QE3 1844 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 ZEB2O60315 1214 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 HOXA13P31271 388 aaPredicted RBP21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 KLHDC7AQ5VTJ3 777 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 SPATS2Q86XZ4 545 aaKnown RBP21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 IFT20Q8IY31 132 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 CHURC1Q8WUH1 139 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 BAP1Q92560 729 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 WRNIP1Q96S55 665 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 FAM207AQ9NSI2 230 aaPredicted RBP21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 GEMIN8Q9NWZ8 242 aaKnown RBP21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 SBF1O95248 1867 aa21.52■■□□□ 1.04
NHLRC1-201ENST00000340650 DICER1Q9UPY3 1922 aaKnown RBP21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 LRRC53A6NM62 1247 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 OPLAHO14841 1288 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 NCK2O43639 380 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 DCAF15Q66K64 600 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 DLK2Q6UY11 383 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 KDM7AQ6ZMT4 941 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 IQCKQ8N0W5 287 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 UIMC1Q96RL1 719 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 ANO3Q9BYT9 981 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 EDEM3Q9BZQ6 932 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 GLT8D2Q9H1C3 349 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 SSU72P8A0A1W2PR75 194 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 MREGQ8N565 214 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 GJA10Q969M2 543 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 NOX5Q96PH1 765 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 PSMB7Q99436 277 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 PAGR1Q9BTK6 254 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 RABEP2Q9H5N1 569 aa21.51■■□□□ 1.03
NHLRC1-201ENST00000340650 MYH10P35580 1976 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 PDCLQ13371 301 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 MTMR2Q13614 643 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 PRKG1Q13976 671 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 CFAP221Q4G0U5 840 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 TTC19Q6DKK2 380 aaPredicted RBP21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 PDXDC1Q6P996 788 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 RRAGAQ7L523 313 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 CD302Q8IX05 232 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 CNPY4Q8N129 248 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 MTMR9Q96QG7 549 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 MMRN2Q9H8L6 949 aa21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 DDX25Q9UHL0 483 aaKnown RBP21.5■■□□□ 1.03
NHLRC1-201ENST00000340650 RBAK-RBAKDNI3L0D1 243 aa21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 C9orf131Q5VYM1 1079 aa21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 RANBP17Q9H2T7 1088 aaKnown RBP21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 FEM1BQ9UK73 627 aa21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 SAMM50Q9Y512 469 aa21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 NDUFAB1O14561 156 aa21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 FGFR1OPO95684 399 aaKnown RBP21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 HNRNPH1P31943 449 aaKnown RBP21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 PAK2Q13177 524 aa21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 ORC2Q13416 577 aaPredicted RBP21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 C1orf131Q8NDD1 294 aaKnown RBP21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 MMTAG2Q9BU76 263 aaKnown RBP21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 SMCHD1A6NHR9 2005 aa21.49■■□□□ 1.03
NHLRC1-201ENST00000340650 CFAP58Q5T655 872 aa21.48■■□□□ 1.03
NHLRC1-201ENST00000340650 PPP4R3AQ6IN85 833 aa21.48■■□□□ 1.03
NHLRC1-201ENST00000340650 FAM160B2Q86V87 743 aa21.48■■□□□ 1.03
NHLRC1-201ENST00000340650 HPS3Q969F9 1004 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms