RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 PDLIM7Q9NR12 457 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 LRWD1Q9UFC0 647 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 NRCAMQ92823 1304 aa18.77■□□□□ 0.6
SFN-201ENST00000339276 TMEM150BA6NC51 233 aa18.76■□□□□ 0.59
SFN-201ENST00000339276 PP2D1A8MPX8 630 aa18.76■□□□□ 0.59
SFN-201ENST00000339276 SLITRK3O94933 977 aa18.76■□□□□ 0.59
SFN-201ENST00000339276 CYP2C9P11712 490 aa18.76■□□□□ 0.59
SFN-201ENST00000339276 MARCKSP29966 332 aaPredicted RBP18.76■□□□□ 0.59
SFN-201ENST00000339276 NASPP49321 788 aaPredicted RBP18.76■□□□□ 0.59
SFN-201ENST00000339276 IGBP1P78318 339 aa18.76■□□□□ 0.59
SFN-201ENST00000339276 GRIN1Q05586 938 aa18.76■□□□□ 0.59
SFN-201ENST00000339276 BBXQ8WY36 941 aaPredicted RBP18.76■□□□□ 0.59
SFN-201ENST00000339276 CHAMP1Q96JM3 812 aa18.76■□□□□ 0.59
SFN-201ENST00000339276 HSD17B14Q9BPX1 270 aa18.76■□□□□ 0.59
SFN-201ENST00000339276 PRDM5Q9NQX1 630 aaPredicted RBP18.76■□□□□ 0.59
SFN-201ENST00000339276 NOD1Q9Y239 953 aa18.76■□□□□ 0.59
SFN-201ENST00000339276 KAT6AQ92794 2004 aa18.76■□□□□ 0.59
SFN-201ENST00000339276 TREHO43280 583 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 HBP1O60381 514 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 MED24O75448 989 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 STBD1O95210 358 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 ADAM17P78536 824 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 NUCB2P80303 420 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 DNM1Q05193 864 aaKnown RBP18.75■□□□□ 0.59
SFN-201ENST00000339276 PDIA5Q14554 519 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 SLC39A14Q15043 492 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 MARCH8Q5T0T0 291 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 TPH2Q8IWU9 490 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 NEK9Q8TD19 979 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 ZBTB10Q96DT7 871 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 FAM167AQ96KS9 214 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 RAB34Q9BZG1 259 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 TMEM39AQ9NV64 488 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 SEPT9Q9UHD8 586 aaPredicted RBP18.75■□□□□ 0.59
SFN-201ENST00000339276 TBX21Q9UL17 535 aa18.75■□□□□ 0.59
SFN-201ENST00000339276 ZMYND8Q9ULU4 1186 aaPredicted RBP18.75■□□□□ 0.59
SFN-201ENST00000339276 TRIM43BA6NCK2 446 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 ZBTB42B2RXF5 422 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 SPATA31C1P0DKV0 1188 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 SYN1P17600 705 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 CDC25AP30304 524 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 STK38Q15208 465 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 XKR3Q5GH77 459 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 CATSPER3Q86XQ3 398 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 C4orf19Q8IY42 314 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 LINC00301Q8NCQ3 95 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 ERMNQ8TAM6 284 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 DHX38Q92620 1227 aaKnown RBP18.74■□□□□ 0.59
SFN-201ENST00000339276 WNT8BQ93098 351 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 TRIM43Q96BQ3 446 aaPredicted RBP18.74■□□□□ 0.59
SFN-201ENST00000339276 ZSWIM4Q9H7M6 989 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 TUBE1Q9UJT0 475 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 FBXO2Q9UK22 296 aaPredicted RBP18.74■□□□□ 0.59
SFN-201ENST00000339276 COL1A2P08123 1366 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 LTBP2Q14767 1821 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 RRN3P2A6NIE6 340 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 DDX11L8A8MPP1 907 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 ZBTB39O15060 712 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 DKC1O60832 514 aaKnown RBP eCLIP18.74■□□□□ 0.59
SFN-201ENST00000339276 GNAT1P11488 350 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 ZNF484Q5JVG2 852 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 HAUS3Q68CZ6 603 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 PLA2G4FQ68DD2 849 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 ANO5Q75V66 913 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 SNX29Q8TEQ0 813 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 TNPO1Q92973 898 aaKnown RBP18.74■□□□□ 0.59
SFN-201ENST00000339276 SH2D3AQ9BRG2 576 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 MMTAG2Q9BU76 263 aaKnown RBP18.74■□□□□ 0.59
SFN-201ENST00000339276 POLR3CQ9BUI4 534 aaPredicted RBP18.74■□□□□ 0.59
SFN-201ENST00000339276 TUFT1Q9NNX1 390 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 NRBP2Q9NSY0 501 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 NR2E3Q9Y5X4 410 aa18.74■□□□□ 0.59
SFN-201ENST00000339276 ARID2Q68CP9 1835 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 A0A087WWV3 80 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 MBLAC1A4D2B0 266 aaPredicted RBP18.73■□□□□ 0.59
SFN-201ENST00000339276 KIAA0355O15063 1070 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 YEATS4O95619 227 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 RPA1P27694 616 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 YWHABP31946 246 aaKnown RBP18.73■□□□□ 0.59
SFN-201ENST00000339276 CCT6AP40227 531 aaKnown RBP18.73■□□□□ 0.59
SFN-201ENST00000339276 PTK7Q13308 1070 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 ECM1Q16610 540 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 MTERF2Q49AM1 385 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 ATL3Q6DD88 541 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 POTEGQ6S5H5 508 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 RUFY4Q6ZNE9 571 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 SERINC5Q86VE9 423 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 NIFKQ9BYG3 293 aaKnown RBP18.73■□□□□ 0.59
SFN-201ENST00000339276 PPP1R12CQ9BZL4 782 aa18.73■□□□□ 0.59
SFN-201ENST00000339276 SRPRBQ9Y5M8 271 aaKnown RBP18.73■□□□□ 0.59
SFN-201ENST00000339276 MORC2Q9Y6X9 1032 aaPredicted RBP18.73■□□□□ 0.59
SFN-201ENST00000339276 UMODL1Q5DID0 1318 aa18.72■□□□□ 0.59
SFN-201ENST00000339276 SPTLC2O15270 562 aa18.72■□□□□ 0.59
SFN-201ENST00000339276 LYPLA2O95372 231 aa18.72■□□□□ 0.59
SFN-201ENST00000339276 ITGB8P26012 769 aa18.72■□□□□ 0.59
SFN-201ENST00000339276 NPEPPSP55786 919 aa18.72■□□□□ 0.59
SFN-201ENST00000339276 TARBP2Q15633 366 aaKnown RBP18.72■□□□□ 0.59
SFN-201ENST00000339276 KRT79Q5XKE5 535 aa18.72■□□□□ 0.59
SFN-201ENST00000339276 MTHFD1LQ6UB35 978 aa18.72■□□□□ 0.59
SFN-201ENST00000339276 CLIC6Q96NY7 704 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms