RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SLC44A4Q53GD3 710 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 MLXIPQ9HAP2 919 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 PGM1P36871 562 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 EFTUD2Q15029 972 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 TRAF7Q6Q0C0 670 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 APOA5Q6Q788 366 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 SARM1Q6SZW1 724 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 OR9Q1Q8NGQ5 310 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 CALR3Q96L12 384 aaKnown RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 RCOR1Q9UKL0 485 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 ARHGAP26Q9UNA1 814 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 BRAFP15056 766 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 NR1H3Q13133 447 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 CYLC2Q14093 348 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 FAM98CQ17RN3 349 aaKnown RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 HOOK2Q96ED9 719 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 PAGE5Q96GU1 130 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 PRMT1Q99873 361 aaKnown RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 EPN3Q9H201 632 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 FAM96AQ9H5X1 160 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 SLC13A4Q9UKG4 626 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 H0YCG3 227 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 NCK2O43639 380 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 GNL1P36915 607 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 ARHGEF16Q5VV41 709 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 ARHGEF25Q86VW2 580 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 ARL8AQ96BM9 186 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 OSBPL9Q96SU4 736 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 LBHD1Q9BQE6 289 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 SFMBT1Q9UHJ3 866 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 FANCAO15360 1455 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 USP17L12C9JPN9 530 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 USP17L21D6R901 530 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 AARSP49588 968 aaKnown RBP eCLIP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 PABPC4Q13310 644 aaKnown RBP eCLIP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 TBC1D10BQ4KMP7 808 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 PPP4R4Q6NUP7 873 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 DDX42Q86XP3 938 aaKnown RBP eCLIP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 DCAF5Q96JK2 942 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 PAGR1Q9BTK6 254 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 ZWILCHQ9H900 591 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 UBN1Q9NPG3 1134 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 KLRF2D3W0D1 207 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 GOLGA8MH3BSY2 632 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 WDR47O94967 919 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 ESRRBO95718 433 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 USP14P54578 494 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 ARL4CP56559 192 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 GCKRQ14397 625 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 SKIV2LQ15477 1246 aaKnown RBP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 LRRC36Q1X8D7 754 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 TAF1BQ53T94 588 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 MDH1BQ5I0G3 518 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 PLA2G4DQ86XP0 818 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 PNMA1Q8ND90 353 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 M0QZ92 97 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 FGAP02671 866 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 SOX5P35711 763 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 KIF23Q02241 960 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 MORF4L2Q15014 288 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 CNGA3Q16281 694 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 TRAPPC3LQ5T215 181 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 LRRC8EQ6NSJ5 796 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 NFRKBQ6P4R8 1299 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 SDR42E1Q8WUS8 393 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 NR1H4Q96RI1 486 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 ADNPQ9H2P0 1102 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 ABHD10Q9NUJ1 306 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 CHCHD3Q9NX63 227 aaKnown RBP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 HDAC6Q9UBN7 1215 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 FNDC3AQ9Y2H6 1198 aaKnown RBP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 MROH5Q6ZUA9 1318 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 LRRIQ4A6NIV6 560 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 LAD1O00515 517 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 UBTFL6P0CB48 400 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 ARL4AP40617 200 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 CATSPER1Q8NEC5 780 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 HSPH1Q92598 858 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 DYTNA2CJ06 578 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 H0Y626 953 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 TRIM16O95361 564 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 ZBED1O96006 694 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 PYGLP06737 847 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 MED21Q13503 144 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 BRDTQ58F21 947 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 LARGE2Q8N3Y3 721 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-201ENST00000334504 SNX25Q9H3E2 840 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 NDST4Q9H3R1 872 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 NUP160Q12769 1436 aa10.5□□□□□ -0.73
COL4A6-201ENST00000334504 SERPINB4P48594 390 aa10.49□□□□□ -0.73
COL4A6-201ENST00000334504 FKBP3Q00688 224 aaKnown RBP10.49□□□□□ -0.73
COL4A6-201ENST00000334504 CUL4AQ13619 759 aa10.49□□□□□ -0.73
COL4A6-201ENST00000334504 RASGRP4Q8TDF6 673 aa10.49□□□□□ -0.73
COL4A6-201ENST00000334504 PCDHA4Q9UN74 947 aa10.49□□□□□ -0.73
COL4A6-201ENST00000334504 KPNA7A9QM74 516 aa10.49□□□□□ -0.73
COL4A6-201ENST00000334504 POLR2MP0CAP2 368 aa10.49□□□□□ -0.73
COL4A6-201ENST00000334504 HIC1Q14526 733 aa10.49□□□□□ -0.73
COL4A6-201ENST00000334504 CCDC144BQ3MJ40 725 aa10.49□□□□□ -0.73
COL4A6-201ENST00000334504 SPATA21Q7Z572 469 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms