RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MIS18BP1Q6P0N0 1132 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 GLG1Q92896 1179 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 BLZF1Q9H2G9 400 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 TMEM63CQ9P1W3 806 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 TCEAL9Q9UHQ7 104 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 MAFBQ9Y5Q3 323 aaPredicted RBP18.48■□□□□ 0.55
SHOX-201ENST00000334060 LGR5O75473 907 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 HOXD8P13378 290 aaPredicted RBP18.48■□□□□ 0.55
SHOX-201ENST00000334060 SFNP31947 248 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 QARSP47897 775 aaKnown RBP18.48■□□□□ 0.55
SHOX-201ENST00000334060 STAT5BP51692 787 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 LRRC41Q15345 812 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 KCNA10Q16322 511 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 HYIQ5T013 277 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 GIMAP8Q8ND71 665 aaPredicted RBP18.48■□□□□ 0.55
SHOX-201ENST00000334060 POLR3CQ9BUI4 534 aaPredicted RBP18.48■□□□□ 0.55
SHOX-201ENST00000334060 UPF3AQ9H1J1 476 aaKnown RBP18.48■□□□□ 0.55
SHOX-201ENST00000334060 BHMT2Q9H2M3 363 aa18.48■□□□□ 0.55
SHOX-201ENST00000334060 ZBTB42B2RXF5 422 aa18.47■□□□□ 0.55
SHOX-201ENST00000334060 PURAQ00577 322 aaKnown RBP18.47■□□□□ 0.55
SHOX-201ENST00000334060 FAM160A1Q05DH4 1040 aa18.47■□□□□ 0.55
SHOX-201ENST00000334060 PLCB4Q15147 1175 aa18.47■□□□□ 0.55
SHOX-201ENST00000334060 RRAGBQ5VZM2 374 aa18.47■□□□□ 0.55
SHOX-201ENST00000334060 KLHDC9Q8NEP7 349 aa18.47■□□□□ 0.55
SHOX-201ENST00000334060 RUSC1Q9BVN2 902 aa18.47■□□□□ 0.55
SHOX-201ENST00000334060 RAB34Q9BZG1 259 aa18.47■□□□□ 0.55
SHOX-201ENST00000334060 AP5M1Q9H0R1 490 aa18.47■□□□□ 0.55
SHOX-201ENST00000334060 FAM13BQ9NYF5 915 aa18.47■□□□□ 0.55
SHOX-201ENST00000334060 KIAA0100Q14667 2235 aaKnown RBP18.47■□□□□ 0.55
SHOX-201ENST00000334060 GOLGA6L22H0YM25 854 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 NKRFO15226 690 aaKnown RBP eCLIP18.46■□□□□ 0.55
SHOX-201ENST00000334060 SSBP05455 408 aaKnown RBP eCLIP18.46■□□□□ 0.55
SHOX-201ENST00000334060 STAT6P42226 847 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 PSMC5P62195 406 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 ZNF200P98182 395 aaPredicted RBP18.46■□□□□ 0.55
SHOX-201ENST00000334060 CSPP1Q1MSJ5 1256 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 COL13A1Q5TAT6 717 aaPredicted RBP18.46■□□□□ 0.55
SHOX-201ENST00000334060 DIS3LQ8TF46 1054 aaKnown RBP18.46■□□□□ 0.55
SHOX-201ENST00000334060 DDX11L8A8MPP1 907 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 ASGR1P07306 291 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 YWHABP31946 246 aaKnown RBP18.46■□□□□ 0.55
SHOX-201ENST00000334060 MNX1P50219 401 aaPredicted RBP18.46■□□□□ 0.55
SHOX-201ENST00000334060 HAUS3Q68CZ6 603 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 CCDC73Q6ZRK6 1079 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 MAEAQ7L5Y9 396 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 RAD54LQ92698 747 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 CEP89Q96ST8 783 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 SEPT9Q9UHD8 586 aaPredicted RBP18.46■□□□□ 0.55
SHOX-201ENST00000334060 GRIN2DO15399 1336 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 EMSYQ7Z589 1322 aa18.46■□□□□ 0.55
SHOX-201ENST00000334060 IGBP1P78318 339 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 DRP2Q13474 957 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 PNOCQ13519 176 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 DGKDQ16760 1214 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 ARSHQ5FYA8 562 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 KRBA2Q6ZNG9 492 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 CKAP2LQ8IYA6 745 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 ERMNQ8TAM6 284 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 ARMC5Q96C12 935 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 ZSWIM4Q9H7M6 989 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 TUFT1Q9NNX1 390 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
SHOX-201ENST00000334060 MYH9P35579 1960 aaKnown RBP18.45■□□□□ 0.54
SHOX-201ENST00000334060 MYMKA6NI61 221 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 H3BRB1 525 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 PPFIA4O75335 1185 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 SLC12A3P55017 1021 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 CUL4BQ13620 913 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 MTERF2Q49AM1 385 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 CAVIN1Q6NZI2 390 aaKnown RBP18.44■□□□□ 0.54
SHOX-201ENST00000334060 AFAP1L1Q8TED9 768 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 CALML4Q96GE6 196 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 PAGE5Q96GU1 130 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 CDK5RAP3Q96JB5 506 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
SHOX-201ENST00000334060 GPRC5CQ9NQ84 441 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 RSPH10B2B2RC85 870 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 TRAK2O60296 914 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 F2P00734 622 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 OATP04181 439 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 PLA2G4BP0C869 781 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 RSPH10BP0C881 870 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 RARRES1P49788 294 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 KIAA0753Q2KHM9 967 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 DYMQ7RTS9 669 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 C4orf19Q8IY42 314 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 LARP4BQ92615 738 aaKnown RBP18.44■□□□□ 0.54
SHOX-201ENST00000334060 HPS3Q969F9 1004 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 Q9Y3F1 56 aa18.44■□□□□ 0.54
SHOX-201ENST00000334060 ARID2Q68CP9 1835 aa18.43■□□□□ 0.54
SHOX-201ENST00000334060 GJB1P08034 283 aa18.43■□□□□ 0.54
SHOX-201ENST00000334060 TXLNAP40222 546 aa18.43■□□□□ 0.54
SHOX-201ENST00000334060 MDM2Q00987 491 aaPredicted RBP18.43■□□□□ 0.54
SHOX-201ENST00000334060 RDM1Q8NG50 284 aa18.43■□□□□ 0.54
SHOX-201ENST00000334060 U2AF1L4Q8WU68 220 aaKnown RBP18.43■□□□□ 0.54
SHOX-201ENST00000334060 AZI2Q9H6S1 392 aa18.43■□□□□ 0.54
SHOX-201ENST00000334060 USO1O60763 962 aaKnown RBP18.42■□□□□ 0.54
SHOX-201ENST00000334060 CPT1AP50416 773 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 ISM2Q6H9L7 571 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 SH3RF1Q7Z6J0 888 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms