RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 RAPGEF1Q13905 1077 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 MYBPC2Q14324 1141 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 EPHA7Q15375 998 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 MEI1Q5TIA1 1274 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 CCDC181Q5TID7 509 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 IRF2BP2Q7Z5L9 587 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 NEK9Q8TD19 979 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 ZNF622Q969S3 477 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC172-201ENST00000333254 WDR11Q9BZH6 1224 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
CCDC172-201ENST00000333254 GOPCQ9HD26 462 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 TBC1D7Q9P0N9 293 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 STIM2Q9P246 746 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 VPS18Q9P253 973 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 SALL4Q9UJQ4 1053 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 ODF2LQ9ULJ1 636 aa11.79□□□□□ -0.52
CCDC172-201ENST00000333254 TBC1D12O60347 775 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 GDF11O95390 407 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 SYF2O95926 243 aaKnown RBP11.78□□□□□ -0.52
CCDC172-201ENST00000333254 NR3C1P04150 777 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 UCHL3P15374 230 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 ACTN2P35609 894 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 CASP5P51878 434 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 JAM2P57087 298 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 PSMC6P62333 389 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 SETQ01105 290 aaPredicted RBP11.78□□□□□ -0.52
CCDC172-201ENST00000333254 PABPC4Q13310 644 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC172-201ENST00000333254 EXOC3L4Q17RC7 722 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 SHROOM1Q2M3G4 852 aaPredicted RBP11.78□□□□□ -0.52
CCDC172-201ENST00000333254 RINT1Q6NUQ1 792 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 NFRKBQ6P4R8 1299 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 B3GNT9Q6UX72 402 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 GBP6Q6ZN66 633 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 STXBP4Q6ZWJ1 553 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 FAM160B2Q86V87 743 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 CHURC1Q8WUH1 139 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 FAM151AQ8WW52 585 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 TBC1D5Q92609 795 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 BORCS6Q96GS4 357 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 INPP4AQ96PE3 977 aaPredicted RBP11.78□□□□□ -0.52
CCDC172-201ENST00000333254 CRACR2AQ9BSW2 395 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 TMOD2Q9NZR1 351 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 CWC15Q9P013 229 aaKnown RBP11.78□□□□□ -0.52
CCDC172-201ENST00000333254 FAN1Q9Y2M0 1017 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 A0A087X0T9 212 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 IVLP07476 585 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 FAM228BP0C875 321 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 PON1P27169 355 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 NPEPPSP55786 919 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 GHRHRQ02643 423 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 C1orf186Q6ZWK4 172 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 SLC35C1Q96A29 364 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 CSRNP1Q96S65 589 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 RUSC1Q9BVN2 902 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 TDRD3Q9H7E2 651 aaKnown RBP11.78□□□□□ -0.52
CCDC172-201ENST00000333254 MRPL11Q9Y3B7 192 aaKnown RBP11.78□□□□□ -0.52
CCDC172-201ENST00000333254 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
CCDC172-201ENST00000333254 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.52
CCDC172-201ENST00000333254 A0A1W2PRG0 241 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 GCOM1H8Y6P7 765 aaPredicted RBP11.77□□□□□ -0.53
CCDC172-201ENST00000333254 PPP1R12BO60237 982 aaPredicted RBP11.77□□□□□ -0.53
CCDC172-201ENST00000333254 FLOT1O75955 427 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 AKAP3O75969 853 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 POLR2MP0CAP2 368 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 SLURP2P0DP57 97 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 MAPTP10636 758 aaKnown RBP11.77□□□□□ -0.53
CCDC172-201ENST00000333254 FERP16591 822 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 RFX1P22670 979 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 KLRC1P26715 233 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 ZNF76P36508 570 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 PRELPP51888 382 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 JAG1P78504 1218 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 APBA1Q02410 837 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 IKQ13123 557 aaPredicted RBP11.77□□□□□ -0.53
CCDC172-201ENST00000333254 ALCAMQ13740 583 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 PPP2R5AQ15172 486 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 USH1GQ495M9 461 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 ALS2CLQ60I27 953 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 C8orf74Q6P047 294 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 NIPA1Q7RTP0 329 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 VPS36Q86VN1 386 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 SLC9A9Q8IVB4 645 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 MREGQ8N565 214 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 GOLGA6L1Q8N7Z2 621 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 PBKQ96KB5 322 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 SPAG5Q96R06 1193 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 SH3GL2Q99962 352 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 LRRC1Q9BTT6 524 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 VPS33BQ9H267 617 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 BHMT2Q9H2M3 363 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCDC172-201ENST00000333254 SIX2Q9NPC8 291 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 GDF3Q9NR23 364 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 TMEM59LQ9UK28 342 aa11.77□□□□□ -0.53
CCDC172-201ENST00000333254 WDR81Q562E7 1941 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 A0A0U1RQG5 324 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms