RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 DEFB128Q7Z7B8 93 aa16.7■□□□□ 0.26
CLRN1-203ENST00000328863 WNT8BQ93098 351 aa16.7■□□□□ 0.26
CLRN1-203ENST00000328863 GJA10Q969M2 543 aa16.7■□□□□ 0.26
CLRN1-203ENST00000328863 VAV3Q9UKW4 847 aa16.7■□□□□ 0.26
CLRN1-203ENST00000328863 MICAL3Q7RTP6 2002 aa16.69■□□□□ 0.26
CLRN1-203ENST00000328863 MBLAC1A4D2B0 266 aaPredicted RBP16.69■□□□□ 0.26
CLRN1-203ENST00000328863 DKC1O60832 514 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLRN1-203ENST00000328863 OATP04181 439 aa16.69■□□□□ 0.26
CLRN1-203ENST00000328863 CTSHP09668 335 aa16.69■□□□□ 0.26
CLRN1-203ENST00000328863 FXR1P51114 621 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLRN1-203ENST00000328863 CUL4AQ13619 759 aa16.69■□□□□ 0.26
CLRN1-203ENST00000328863 ZNF484Q5JVG2 852 aa16.69■□□□□ 0.26
CLRN1-203ENST00000328863 TMEM240Q5SV17 173 aa16.69■□□□□ 0.26
CLRN1-203ENST00000328863 B3GNT9Q6UX72 402 aa16.69■□□□□ 0.26
CLRN1-203ENST00000328863 HSCBQ8IWL3 235 aa16.69■□□□□ 0.26
CLRN1-203ENST00000328863 GBF1Q92538 1859 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 RSPH10B2B2RC85 870 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 M0QZ92 97 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 FGBP02675 491 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 RSPH10BP0C881 870 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 ATP2B1P20020 1258 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 TTC38Q5R3I4 469 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 ZNF618Q5T7W0 954 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 MCTP1Q6DN14 999 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 ZNF365Q70YC5 407 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 RPAINQ86UA6 219 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 TET1Q8NFU7 2136 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 HERVK_113Q902F9 699 aa16.68■□□□□ 0.26
CLRN1-203ENST00000328863 FTOQ9C0B1 505 aaKnown RBP eCLIP16.68■□□□□ 0.26
CLRN1-203ENST00000328863 ZBBXA8MT70 800 aa16.67■□□□□ 0.26
CLRN1-203ENST00000328863 KIF28PB7ZC32 967 aa16.67■□□□□ 0.26
CLRN1-203ENST00000328863 BAIAP3O94812 1187 aa16.67■□□□□ 0.26
CLRN1-203ENST00000328863 PDCP20941 246 aa16.67■□□□□ 0.26
CLRN1-203ENST00000328863 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLRN1-203ENST00000328863 MCM7P33993 719 aa16.67■□□□□ 0.26
CLRN1-203ENST00000328863 NCAPH2Q6IBW4 605 aa16.67■□□□□ 0.26
CLRN1-203ENST00000328863 NEK9Q8TD19 979 aa16.67■□□□□ 0.26
CLRN1-203ENST00000328863 HAS1Q92839 578 aa16.67■□□□□ 0.26
CLRN1-203ENST00000328863 INTS4Q96HW7 963 aaKnown RBP16.67■□□□□ 0.26
CLRN1-203ENST00000328863 SEPT9Q9UHD8 586 aaPredicted RBP16.67■□□□□ 0.26
CLRN1-203ENST00000328863 EVPLQ92817 2033 aa16.67■□□□□ 0.26
CLRN1-203ENST00000328863 CXCL10P02778 98 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 OR52Z1P0C646 297 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 PSMC5P62195 406 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 UGCGQ16739 394 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 MARCH8Q5T0T0 291 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
CLRN1-203ENST00000328863 CNKSR3Q6P9H4 555 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 TRAF7Q6Q0C0 670 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 RUFY4Q6ZNE9 571 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 OTOP2Q7RTS6 562 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 TRAPPC12Q8WVT3 735 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 SNX21Q969T3 373 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 FAM49AQ9H0Q0 323 aaPredicted RBP16.66■□□□□ 0.26
CLRN1-203ENST00000328863 PCDHA12Q9UN75 941 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 PCDHA2Q9Y5H9 948 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 LOXHD1Q8IVV2 1947 aa16.66■□□□□ 0.26
CLRN1-203ENST00000328863 SMIM35A0A1B0GVV1 85 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 WNT7AO00755 349 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 ZNF862O60290 1169 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 EFCAB14O75071 495 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 ATP4AP20648 1035 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 QARSP47897 775 aaKnown RBP16.65■□□□□ 0.26
CLRN1-203ENST00000328863 MRPS6P82932 125 aaKnown RBP16.65■□□□□ 0.26
CLRN1-203ENST00000328863 TMEM266Q2M3C6 531 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 RILPL1Q5EBL4 403 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 XKR3Q5GH77 459 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 RASIP1Q5U651 963 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 IER5Q5VY09 327 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 MTHFD1LQ6UB35 978 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 C16orf59Q7L2K0 433 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 TRMT1LQ7Z2T5 733 aaKnown RBP16.65■□□□□ 0.26
CLRN1-203ENST00000328863 BANK1Q8NDB2 785 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 DNAJB3Q8WWF6 145 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 LXNQ9BS40 222 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 TTC12Q9H892 705 aaPredicted RBP16.65■□□□□ 0.26
CLRN1-203ENST00000328863 NRBP2Q9NSY0 501 aa16.65■□□□□ 0.26
CLRN1-203ENST00000328863 PTPRSQ13332 1948 aa16.64■□□□□ 0.26
CLRN1-203ENST00000328863 EML1O00423 815 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 SOX1O00570 391 aaPredicted RBP16.64■□□□□ 0.25
CLRN1-203ENST00000328863 MAGEB2O15479 319 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 NBNO60934 754 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 C22orf31O95567 290 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 P4HBP07237 508 aaKnown RBP16.64■□□□□ 0.25
CLRN1-203ENST00000328863 TXKP42681 527 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 KCNJ6P48051 423 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 SMAD3P84022 425 aaKnown RBP16.64■□□□□ 0.25
CLRN1-203ENST00000328863 SPIRE1Q08AE8 756 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 EPHA7Q15375 998 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 FAM26DQ5JW98 314 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 GPR153Q6NV75 609 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 MAP7D2Q96T17 732 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 SLC9A7Q96T83 725 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 TRPV2Q9Y5S1 764 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 SLC4A7Q9Y6M7 1214 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 MYH15Q9Y2K3 1946 aa16.64■□□□□ 0.25
CLRN1-203ENST00000328863 VPS37CA5D8V6 355 aaPredicted RBP16.63■□□□□ 0.25
CLRN1-203ENST00000328863 ZBTB42B2RXF5 422 aa16.63■□□□□ 0.25
CLRN1-203ENST00000328863 LAD1O00515 517 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms