RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 FGGP02679 453 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 KRT33BQ14525 404 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 CCDC138Q96M89 665 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NUDCD1Q96RS6 583 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RAVER2Q9HCJ3 691 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ABT1Q9ULW3 272 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PLAAQ9Y263 795 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NPC1L1Q9UHC9 1359 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PRR29P0C7W0 189 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 FAM83BQ5T0W9 1011 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RNF139Q8WU17 664 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 CCDC17Q96LX7 622 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NDST4Q9H3R1 872 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SAYSD1Q9NPB0 183 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ADAMTS1Q9UHI8 967 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SRPRBQ9Y5M8 271 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RASGRF2O14827 1237 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 CCNA1P78396 465 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PYROXD1Q8WU10 500 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NOC2LQ9Y3T9 749 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ABCC2Q92887 1545 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TMEM2Q9UHN6 1383 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NCK2O43639 380 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NGRNQ9NPE2 291 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TTC7AQ9ULT0 858 aaPredicted RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 A0A0G2JND7 137 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 EIF3CLB5ME19 914 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PRPF3O43395 683 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PTPN12Q05209 780 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NFX1Q12986 1120 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SYNE4Q8N205 404 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NLGN1Q8N2Q7 840 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 EIF3CQ99613 913 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SMYD3Q9H7B4 428 aa14.6□□□□□ -0.07
CHRFAM7A-201ENST00000299847 INSRP06213 1382 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TRAPPC10P48553 1259 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TAF11Q15544 211 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 CC2D2BQ6DHV5 1058 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MRPL47Q9HD33 250 aaKnown RBP14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ADD3Q9UEY8 706 aaKnown RBP14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 IKBKBO14920 756 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MCAMP43121 646 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 HLFQ16534 295 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 CYB5R4Q7L1T6 521 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ERICH1Q86X53 443 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 JPH2Q9BR39 696 aaPredicted RBP14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SLC4A7Q9Y6M7 1214 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 C21orf2O43822 256 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SPATS2Q86XZ4 545 aaKnown RBP14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SUCLA2Q9P2R7 463 aaPredicted RBP14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 HEY1Q9Y5J3 304 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MAGI2Q86UL8 1455 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PFDN1O60925 122 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 GH2P01242 217 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 STAT3P40763 770 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 POLE2P56282 527 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PBKQ96KB5 322 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 FMO2Q99518 471 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ELAC2Q9BQ52 826 aaKnown RBP14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 GOLPH3LQ9H4A5 285 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PCP11498 1178 aaKnown RBP14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 HADHAP40939 763 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 OCRLQ01968 901 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ZNF211Q13398 564 aaPredicted RBP14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TMED1Q13445 227 aa14.59□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PNMA6FA0A0J9YX94 578 aa14.58□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PIK3R2O00459 728 aa14.58□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NR1D1P20393 614 aa14.58□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SYCP2LQ5T4T6 812 aa14.58□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TBC1D10CQ8IV04 446 aa14.58□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TEX2Q8IWB9 1127 aa14.58□□□□□ -0.07
CHRFAM7A-201ENST00000299847 FLAD1Q8NFF5 587 aa14.58□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SLITRK6Q9H5Y7 841 aa14.58□□□□□ -0.07
CHRFAM7A-201ENST00000299847 JRKLQ9Y4A0 524 aa14.58□□□□□ -0.07
CHRFAM7A-201ENST00000299847 CREB3O43889 395 aa14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SASH1O94885 1247 aa14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 IL6STP40189 918 aaPredicted RBP14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 APBA1Q02410 837 aa14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 LMCD1Q9NZU5 365 aa14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SNX24Q9Y343 169 aa14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TBC1D1Q86TI0 1168 aaPredicted RBP14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ADGRL2O95490 1459 aa14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ARMC9Q7Z3E5 817 aa14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PI4KBQ9UBF8 816 aa14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PACSIN2Q9UNF0 486 aaPredicted RBP14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 METP08581 1390 aa14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ABCA5Q8WWZ7 1642 aa14.58□□□□□ -0.08
CHRFAM7A-201ENST00000299847 MAP3K7O43318 606 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 LUC7L3O95232 432 aaKnown RBP14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RPAINQ86UA6 219 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 FBXL13Q8NEE6 735 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SARS2Q9NP81 518 aaKnown RBP14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 DNAJC12Q9UKB3 198 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PCDHA6Q9UN73 950 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PCDHA8Q9Y5H6 950 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CCNE1P24864 410 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GCLMP48507 274 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CASP8Q14790 479 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms