RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 WNT8BQ93098 351 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
HMGB2-201ENST00000296503 MAFBQ9Y5Q3 323 aaPredicted RBP13.61□□□□□ -0.23
HMGB2-201ENST00000296503 TBX3O15119 743 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 TRAK2O60296 914 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 ADAM17P78536 824 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 TRIM71Q2Q1W2 868 aaKnown RBP13.61□□□□□ -0.23
HMGB2-201ENST00000296503 LRIT3Q3SXY7 679 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 MCTP1Q6DN14 999 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 OTOP2Q7RTS6 562 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 SLFN12Q8IYM2 578 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 ATP8B4Q8TF62 1192 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 KCNMB3Q9NPA1 279 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 TUBE1Q9UJT0 475 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 RSPH10B2B2RC85 870 aa13.6□□□□□ -0.23
HMGB2-201ENST00000296503 PARNO95453 639 aaKnown RBP13.6□□□□□ -0.23
HMGB2-201ENST00000296503 RSPH10BP0C881 870 aa13.6□□□□□ -0.23
HMGB2-201ENST00000296503 ATP4AP20648 1035 aa13.6□□□□□ -0.23
HMGB2-201ENST00000296503 FXR1P51114 621 aaKnown RBP eCLIP13.6□□□□□ -0.235e-8■■□□□ 12.8
HMGB2-201ENST00000296503 RBL2Q08999 1139 aa13.6□□□□□ -0.23
HMGB2-201ENST00000296503 SKOR2Q2VWA4 1001 aaPredicted RBP13.6□□□□□ -0.23
HMGB2-201ENST00000296503 RSPH3Q86UC2 560 aa13.6□□□□□ -0.23
HMGB2-201ENST00000296503 NOSTRINQ8IVI9 506 aa13.6□□□□□ -0.23
HMGB2-201ENST00000296503 RDM1Q8NG50 284 aa13.6□□□□□ -0.23
HMGB2-201ENST00000296503 TRAPPC12Q8WVT3 735 aa13.6□□□□□ -0.23
HMGB2-201ENST00000296503 HAS1Q92839 578 aa13.6□□□□□ -0.23
HMGB2-201ENST00000296503 NRBP2Q9NSY0 501 aa13.6□□□□□ -0.23
HMGB2-201ENST00000296503 ESPNB1AK53 854 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 PFKMP08237 780 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 CTSHP09668 335 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 MCM7P33993 719 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 CALCRLQ16602 461 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 ZNF484Q5JVG2 852 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 MARCH8Q5T0T0 291 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 LARP1BQ659C4 914 aaKnown RBP13.59□□□□□ -0.23
HMGB2-201ENST00000296503 TAF2Q6P1X5 1199 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 RUFY4Q6ZNE9 571 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 DNAJB3Q8WWF6 145 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 BBXQ8WY36 941 aaPredicted RBP13.59□□□□□ -0.23
HMGB2-201ENST00000296503 NAP1L5Q96NT1 182 aaPredicted RBP13.59□□□□□ -0.23
HMGB2-201ENST00000296503 MTIF3Q9H2K0 278 aaKnown RBP13.59□□□□□ -0.23
HMGB2-201ENST00000296503 NOL7Q9UMY1 257 aaKnown RBP13.59□□□□□ -0.23
HMGB2-201ENST00000296503 PCDHA12Q9UN75 941 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 RANBP2P49792 3224 aaKnown RBP13.59□□□□□ -0.23
HMGB2-201ENST00000296503 MYH9P35579 1960 aaKnown RBP13.59□□□□□ -0.23
HMGB2-201ENST00000296503 ZBBXA8MT70 800 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 KIF28PB7ZC32 967 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 SOX1O00570 391 aaPredicted RBP13.59□□□□□ -0.23
HMGB2-201ENST00000296503 NEMFO60524 1076 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 ACTN1P12814 892 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 KLRC1P26715 233 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 DDIT3P35638 169 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 TXKP42681 527 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 CUL4AQ13619 759 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 ZNF174Q15697 407 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 SNX21Q969T3 373 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 ZBTB10Q96DT7 871 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 LRCH3Q96II8 777 aa13.59□□□□□ -0.23
HMGB2-201ENST00000296503 FAM49AQ9H0Q0 323 aaPredicted RBP13.59□□□□□ -0.23
HMGB2-201ENST00000296503 MBLAC1A4D2B0 266 aaPredicted RBP13.58□□□□□ -0.24
HMGB2-201ENST00000296503 WNT7AO00755 349 aa13.58□□□□□ -0.24
HMGB2-201ENST00000296503 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.243e-7■■□□□ 12.1
HMGB2-201ENST00000296503 PPP2R5CQ13362 524 aa13.58□□□□□ -0.24
HMGB2-201ENST00000296503 NCAPH2Q6IBW4 605 aa13.58□□□□□ -0.24
HMGB2-201ENST00000296503 MTHFD1LQ6UB35 978 aa13.58□□□□□ -0.24
HMGB2-201ENST00000296503 B3GNT9Q6UX72 402 aa13.58□□□□□ -0.24
HMGB2-201ENST00000296503 HERVK_113Q902F9 699 aa13.58□□□□□ -0.24
HMGB2-201ENST00000296503 FAM167AQ96KS9 214 aa13.58□□□□□ -0.24
HMGB2-201ENST00000296503 ZMYND15Q9H091 742 aa13.58□□□□□ -0.24
HMGB2-201ENST00000296503 GRPEL1Q9HAV7 217 aa13.58□□□□□ -0.24
HMGB2-201ENST00000296503 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.57□□□□□ -0.24
HMGB2-201ENST00000296503 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.57□□□□□ -0.24
HMGB2-201ENST00000296503 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
HMGB2-201ENST00000296503 EML1O00423 815 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 CAND2O75155 1236 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 OATP04181 439 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 UGCGQ16739 394 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 TTC38Q5R3I4 469 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 BANK1Q8NDB2 785 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 VWCEQ96DN2 955 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 PDCL3Q9H2J4 239 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 TTC12Q9H892 705 aaPredicted RBP13.57□□□□□ -0.24
HMGB2-201ENST00000296503 VAV3Q9UKW4 847 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 CEP131Q9UPN4 1083 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 PCDHA2Q9Y5H9 948 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 SCN5AQ14524 2016 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 COL1A2P08123 1366 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 ZNF862O60290 1169 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 NBNO60934 754 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 PRKCEQ02156 737 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 GPNMBQ14956 572 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 EPHA7Q15375 998 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 TRAF7Q6Q0C0 670 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 CXXC1Q9P0U4 656 aaPredicted RBP13.57□□□□□ -0.24
HMGB2-201ENST00000296503 SLC4A7Q9Y6M7 1214 aa13.57□□□□□ -0.24
HMGB2-201ENST00000296503 IGSF9BQ9UPX0 1349 aa13.56□□□□□ -0.24
HMGB2-201ENST00000296503 SMIM35A0A1B0GVV1 85 aa13.56□□□□□ -0.24
HMGB2-201ENST00000296503 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.24
HMGB2-201ENST00000296503 RPLP2P05387 115 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms