RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 PRKCEQ02156 737 aa18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 NFRKBQ6P4R8 1299 aa18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 POTEBQ6S5H4 581 aa18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 SLC39A5Q6ZMH5 540 aa18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 CKAP2LQ8IYA6 745 aa18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 ATP8B4Q8TF62 1192 aa18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 BBXQ8WY36 941 aaPredicted RBP18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 TCHHQ07283 1943 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 ARVCFO00192 962 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 OATP04181 439 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 UBA7P41226 1012 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 CDK7P50613 346 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 ECM1Q16610 540 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 XKR3Q5GH77 459 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 C1orf53Q5VUE5 145 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 USP49Q70CQ1 688 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 SESTD1Q86VW0 696 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 C7orf31Q8N865 590 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 PPP1R13LQ8WUF5 828 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 EPSTI1Q96J88 318 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 FAM167AQ96KS9 214 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 SEZ6LQ9BYH1 1024 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 CCSER1Q9C0I3 900 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 HDAC6Q9UBN7 1215 aa18.62■□□□□ 0.57
CHCHD3-201ENST00000262570 HBP1O60381 514 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 SMIM10L2AP0DMW4 78 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 SMIM10L2BP0DMW5 78 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 ATN1P54259 1190 aaPredicted RBP18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 SNX17Q15036 470 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 HYIQ5T013 277 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 ADALQ6DHV7 355 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 CLEC17AQ6ZS10 378 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 ANO5Q75V66 913 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 TRMT1LQ7Z2T5 733 aaKnown RBP18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 CABP7Q86V35 215 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 SYMPKQ92797 1274 aaKnown RBP18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 NRBP2Q9NSY0 501 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 TRPC6Q9Y210 931 aa18.61■□□□□ 0.57
CHCHD3-201ENST00000262570 ZBTB39O15060 712 aa18.6■□□□□ 0.57
CHCHD3-201ENST00000262570 SLC26A4O43511 780 aa18.6■□□□□ 0.57
CHCHD3-201ENST00000262570 INSRRP14616 1297 aa18.6■□□□□ 0.57
CHCHD3-201ENST00000262570 HOXC8P31273 242 aa18.6■□□□□ 0.57
CHCHD3-201ENST00000262570 PTPN11Q06124 597 aaPredicted RBP18.6■□□□□ 0.57
CHCHD3-201ENST00000262570 POTEGQ6S5H5 508 aa18.6■□□□□ 0.57
CHCHD3-201ENST00000262570 SHC4Q6S5L8 630 aa18.6■□□□□ 0.57
CHCHD3-201ENST00000262570 NIFKQ9BYG3 293 aaKnown RBP18.6■□□□□ 0.57
CHCHD3-201ENST00000262570 GTF2IRD1Q9UHL9 959 aa18.6■□□□□ 0.57
CHCHD3-201ENST00000262570 NRCAMQ92823 1304 aa18.6■□□□□ 0.57
CHCHD3-201ENST00000262570 YWHABP31946 246 aaKnown RBP18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 PPFIA1Q13136 1202 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 FAM47CQ5HY64 1035 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 PNMA5Q96PV4 448 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 NACC1Q96RE7 527 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 NT5C3AQ9H0P0 336 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 SETD4Q9NVD3 440 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 KIAA1024Q9UPX6 916 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 KDM3AQ9Y4C1 1321 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 WDR81Q562E7 1941 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 MYH9P35579 1960 aaKnown RBP18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 TMEM150BA6NC51 233 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 DDX11L8A8MPP1 907 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 ZBTB42B2RXF5 422 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 XRCC6P12956 609 aaKnown RBP eCLIP18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 ADAM17P78536 824 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 GRB10Q13322 594 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 HIC1Q14526 733 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 GRIK4Q16099 956 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 OTUD6AQ7L8S5 288 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 KCTD17Q8N5Z5 321 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 PIGOQ8TEQ8 1089 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 CALML4Q96GE6 196 aa18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 DDX19AQ9NUU7 478 aaKnown RBP18.59■□□□□ 0.57
CHCHD3-201ENST00000262570 A0A087WWV3 80 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 C17orf102A2RUQ5 167 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 RRN3P2A6NIE6 340 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 TXLNAP40222 546 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 KARSQ15046 597 aaKnown RBP18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 TARBP2Q15633 366 aaKnown RBP18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 ZRSR1Q15695 479 aaKnown RBP18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 LRRC26Q2I0M4 334 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 TMEM119Q4V9L6 283 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 ZNF484Q5JVG2 852 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 RESP18Q5W5W9 173 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 GDF6Q6KF10 455 aaPredicted RBP18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 ANKRD33Q7Z3H0 272 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 LMBR1Q8WVP7 490 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 ANKEF1Q9NU02 776 aa18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 SEPT9Q9UHD8 586 aaPredicted RBP18.58■□□□□ 0.56
CHCHD3-201ENST00000262570 COL1A2P08123 1366 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 MROH7Q68CQ1 1323 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 GNAT1P11488 350 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 CMA1P23946 247 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 NPEPPSP55786 919 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 CSPP1Q1MSJ5 1256 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 MARCH8Q5T0T0 291 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 PLA2G4FQ68DD2 849 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 KCNK18Q7Z418 384 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 TMEM87AQ8NBN3 555 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 TRAPPC12Q8WVT3 735 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 CDK5RAP3Q96JB5 506 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms