RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 GFPT1Q06210 699 aaPredicted RBP24.78■■□□□ 1.56
MCF2L-201ENST00000261963 IQCEQ6IPM2 695 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.78■■□□□ 1.56
MCF2L-201ENST00000261963 A6NNZ2 444 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 OPA1O60313 960 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 ENTPD3O75355 529 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 CHRNA5P30532 468 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 HOXA13P31271 388 aaPredicted RBP24.78■■□□□ 1.56
MCF2L-201ENST00000261963 CIITAP33076 1130 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 MAGEA1P43355 309 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 PABPC4Q13310 644 aaKnown RBP eCLIP24.78■■□□□ 1.56
MCF2L-201ENST00000261963 TUBB8Q3ZCM7 444 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 PRMT6Q96LA8 375 aaPredicted RBP24.78■■□□□ 1.56
MCF2L-201ENST00000261963 ZHX3Q9H4I2 956 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 MSH4O15457 936 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 KIAA0754O94854 1291 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 SF3B2Q13435 895 aaKnown RBP24.77■■□□□ 1.56
MCF2L-201ENST00000261963 CREG2Q8IUH2 290 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 SYT2Q8N9I0 419 aaPredicted RBP24.77■■□□□ 1.56
MCF2L-201ENST00000261963 CYP2W1Q8TAV3 490 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 C7orf43Q8WVR3 580 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 A1CFQ9NQ94 594 aaKnown RBP24.77■■□□□ 1.56
MCF2L-201ENST00000261963 VAV3Q9UKW4 847 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 H0YHG0 523 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 ADAM9Q13443 819 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 EDRF1Q3B7T1 1238 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 RBM26Q5T8P6 1007 aaKnown RBP24.77■■□□□ 1.56
MCF2L-201ENST00000261963 ERMNQ8TAM6 284 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 SYN2Q92777 582 aaPredicted RBP24.77■■□□□ 1.56
MCF2L-201ENST00000261963 SUFUQ9UMX1 484 aa24.77■■□□□ 1.56
MCF2L-201ENST00000261963 RBAK-RBAKDNI3L0D1 243 aa24.76■■□□□ 1.55
MCF2L-201ENST00000261963 SND1Q7KZF4 910 aaKnown RBP eCLIP24.76■■□□□ 1.55
MCF2L-201ENST00000261963 OTUD6BQ8N6M0 293 aa24.76■■□□□ 1.55
MCF2L-201ENST00000261963 BANK1Q8NDB2 785 aa24.76■■□□□ 1.55
MCF2L-201ENST00000261963 FAM20AQ96MK3 541 aa24.76■■□□□ 1.55
MCF2L-201ENST00000261963 REEP2Q9BRK0 252 aa24.76■■□□□ 1.55
MCF2L-201ENST00000261963 DNM3Q9UQ16 869 aa24.76■■□□□ 1.55
MCF2L-201ENST00000261963 HOXD13P35453 343 aa24.76■■□□□ 1.55
MCF2L-201ENST00000261963 POLR2FP61218 127 aaKnown RBP24.76■■□□□ 1.55
MCF2L-201ENST00000261963 PPP4R3CPQ6ZMV5 832 aa24.76■■□□□ 1.55
MCF2L-201ENST00000261963 SPATS2Q86XZ4 545 aaKnown RBP24.76■■□□□ 1.55
MCF2L-201ENST00000261963 SPICE1Q8N0Z3 855 aa24.76■■□□□ 1.55
MCF2L-201ENST00000261963 NDUFAB1O14561 156 aa24.75■■□□□ 1.55
MCF2L-201ENST00000261963 TTC19Q6DKK2 380 aaPredicted RBP24.75■■□□□ 1.55
MCF2L-201ENST00000261963 EPM2AIP1Q7L775 607 aaPredicted RBP24.75■■□□□ 1.55
MCF2L-201ENST00000261963 CSRNP1Q96S65 589 aa24.75■■□□□ 1.55
MCF2L-201ENST00000261963 PRR12Q9ULL5 1215 aa24.75■■□□□ 1.55
MCF2L-201ENST00000261963 FNTAP49354 379 aa24.75■■□□□ 1.55
MCF2L-201ENST00000261963 SKOR1P84550 965 aa24.75■■□□□ 1.55
MCF2L-201ENST00000261963 TDRD12Q587J7 1177 aaKnown RBP24.75■■□□□ 1.55
MCF2L-201ENST00000261963 SFMBT2Q5VUG0 894 aa24.75■■□□□ 1.55
MCF2L-201ENST00000261963 SFR1Q86XK3 245 aa24.75■■□□□ 1.55
MCF2L-201ENST00000261963 ANKRD13CQ8N6S4 541 aa24.75■■□□□ 1.55
MCF2L-201ENST00000261963 TACO1Q9BSH4 297 aaKnown RBP24.75■■□□□ 1.55
MCF2L-201ENST00000261963 NUCKS1Q9H1E3 243 aaKnown RBP24.75■■□□□ 1.55
MCF2L-201ENST00000261963 YDJCA8MPS7 323 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 FSBPO95073 299 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 NR2F2P24468 414 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 RASSF7Q02833 373 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 JPH2Q9BR39 696 aaPredicted RBP24.74■■□□□ 1.55
MCF2L-201ENST00000261963 CETN3O15182 167 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 SERPING1P05155 500 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 CYP3A4P08684 503 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 PRLRP16471 622 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 C2orf54Q08AI8 447 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 SLC9C1Q4G0N8 1177 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 KIAA1755Q5JYT7 1200 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 GANQ9H2C0 597 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 TRAF3IP3Q9Y228 551 aa24.74■■□□□ 1.55
MCF2L-201ENST00000261963 MYO1FO00160 1098 aa24.73■■□□□ 1.55
MCF2L-201ENST00000261963 EPB41P11171 864 aaKnown RBP24.73■■□□□ 1.55
MCF2L-201ENST00000261963 ECE1P42892 770 aa24.73■■□□□ 1.55
MCF2L-201ENST00000261963 CYP4A11Q02928 519 aa24.73■■□□□ 1.55
MCF2L-201ENST00000261963 ZNF572Q7Z3I7 529 aaPredicted RBP24.73■■□□□ 1.55
MCF2L-201ENST00000261963 BCAS3Q9H6U6 928 aa24.73■■□□□ 1.55
MCF2L-201ENST00000261963 COL2A1P02458 1487 aaPredicted RBP24.73■■□□□ 1.55
MCF2L-201ENST00000261963 PIK3CDO00329 1044 aa24.73■■□□□ 1.55
MCF2L-201ENST00000261963 EML1O00423 815 aa24.73■■□□□ 1.55
MCF2L-201ENST00000261963 MEFVO15553 781 aaPredicted RBP24.73■■□□□ 1.55
MCF2L-201ENST00000261963 KCNH2Q12809 1159 aa24.73■■□□□ 1.55
MCF2L-201ENST00000261963 CC2D2BQ6DHV5 1058 aa24.73■■□□□ 1.55
MCF2L-201ENST00000261963 ALS2CR12Q96Q35 445 aa24.73■■□□□ 1.55
MCF2L-201ENST00000261963 IGLV3-22A0A075B6J6 115 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 RSPH10B2B2RC85 870 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 RSPH10BP0C881 870 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 MYBP10242 640 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 KNOP1Q1ED39 458 aaKnown RBP24.72■■□□□ 1.55
MCF2L-201ENST00000261963 NFRKBQ6P4R8 1299 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 RUBCNQ92622 972 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 OSBPL9Q96SU4 736 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 RUFY1Q96T51 708 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 RUSC1Q9BVN2 902 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 SMCHD1A6NHR9 2005 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 DPY19L2P1Q6NXN4 242 aa24.72■■□□□ 1.55
MCF2L-201ENST00000261963 EIF2AK1Q9BQI3 630 aaKnown RBP24.72■■□□□ 1.55
MCF2L-201ENST00000261963 MYH10P35580 1976 aa24.71■■□□□ 1.55
MCF2L-201ENST00000261963 MMGT1Q8N4V1 131 aa24.71■■□□□ 1.55
MCF2L-201ENST00000261963 ACER1Q8TDN7 264 aa24.71■■□□□ 1.55
MCF2L-201ENST00000261963 CNKSR1Q969H4 720 aa24.71■■□□□ 1.55
MCF2L-201ENST00000261963 POLR3CQ9BUI4 534 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms