RNA–Protein interactions for RNA: ENST00000256151.7

CCDC59-201, Transcript of coiled-coil domain containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC59, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-201ENST00000256151 NUDT12Q9BQG2 462 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 CXorf56Q9H5V9 222 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 TMEM260Q9NX78 707 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 STXBP5LQ9Y2K9 1186 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 DIS3Q9Y2L1 958 aaKnown RBP17.7■□□□□ 0.42
CCDC59-201ENST00000256151 DDX60LQ5H9U9 1706 aaKnown RBP17.7■□□□□ 0.42
CCDC59-201ENST00000256151 FRMD3A2A2Y4 597 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 CETN3O15182 167 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 C21orf2O43822 256 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 CTNNA1P35221 906 aaKnown RBP17.7■□□□□ 0.42
CCDC59-201ENST00000256151 CDR1P51861 262 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 PREPLQ4J6C6 727 aaPredicted RBP17.7■□□□□ 0.42
CCDC59-201ENST00000256151 ASPRV1Q53RT3 343 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 WLSQ5T9L3 541 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 USP17L2Q6R6M4 530 aa17.7■□□□□ 0.42
CCDC59-201ENST00000256151 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
CCDC59-201ENST00000256151 PITPNM2Q9BZ72 1349 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 PLIN4Q96Q06 1357 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 POTEMA6NI47 508 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 SART1O43290 800 aaKnown RBP17.69■□□□□ 0.42
CCDC59-201ENST00000256151 TDP2O95551 362 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 CCDC172P0C7W6 258 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 RDXP35241 583 aaKnown RBP17.69■□□□□ 0.42
CCDC59-201ENST00000256151 IFFO1Q0D2I5 559 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 TRADDQ15628 312 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 FAM133AQ8N9E0 248 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 GLIS3Q8NEA6 775 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 PACSIN1Q9BY11 444 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 SLC40A1Q9NP59 571 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 SWAP70Q9UH65 585 aa17.69■□□□□ 0.42
CCDC59-201ENST00000256151 CEP104O60308 925 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 FLOT1O75955 427 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 C15orf52Q6ZUT6 534 aaKnown RBP17.68■□□□□ 0.42
CCDC59-201ENST00000256151 SLC44A5Q8NCS7 719 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 TPCN2Q8NHX9 752 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 TGFBRAP1Q8WUH2 860 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 ZKSCAN4Q969J2 545 aaPredicted RBP17.68■□□□□ 0.42
CCDC59-201ENST00000256151 NAGPAQ9UK23 515 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 PACSIN2Q9UNF0 486 aaPredicted RBP17.68■□□□□ 0.42
CCDC59-201ENST00000256151 LEMD3Q9Y2U8 911 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 ANKRD31Q8N7Z5 1873 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 PLCG2P16885 1265 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 EPS15P42566 896 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 CLK2P49760 499 aaKnown RBP17.68■□□□□ 0.42
CCDC59-201ENST00000256151 PTK2Q05397 1052 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 KCNH2Q12809 1159 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 CLUL1Q15846 466 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 RBM17Q96I25 401 aaKnown RBP17.68■□□□□ 0.42
CCDC59-201ENST00000256151 MXD3Q9BW11 206 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 KDM4CQ9H3R0 1056 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 PPANQ9NQ55 473 aaKnown RBP17.68■□□□□ 0.42
CCDC59-201ENST00000256151 TRAF3IP3Q9Y228 551 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 C10orf71Q711Q0 1435 aa17.68■□□□□ 0.42
CCDC59-201ENST00000256151 MYH4Q9Y623 1939 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 KLRG2A4D1S0 409 aaPredicted RBP17.67■□□□□ 0.42
CCDC59-201ENST00000256151 ADAM9Q13443 819 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 ZNF571Q7Z3V5 609 aaPredicted RBP17.67■□□□□ 0.42
CCDC59-201ENST00000256151 VPS36Q86VN1 386 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 CACNA2D3Q8IZS8 1091 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 METTL13Q8N6R0 699 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 SCFD1Q8WVM8 642 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 HAS1Q92839 578 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 TATDN2Q93075 761 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 SEC16BQ96JE7 1060 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 CCDC114Q96M63 670 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 CPVLQ9H3G5 476 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 EMILIN3Q9NT22 766 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 ANKIB1Q9P2G1 1089 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
CCDC59-201ENST00000256151 NOC2LQ9Y3T9 749 aaKnown RBP17.67■□□□□ 0.42
CCDC59-201ENST00000256151 CDK5RAP2Q96SN8 1893 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 LOC102724159A0A0B4J2E5 919 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 SNHG28P0DPA3 235 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 HPDP32754 393 aaPredicted RBP17.66■□□□□ 0.42
CCDC59-201ENST00000256151 NEDD9Q14511 834 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 PWP2Q15269 919 aaKnown RBP17.66■□□□□ 0.42
CCDC59-201ENST00000256151 ECM1Q16610 540 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 ANKRD20A8PQ5CZ79 823 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 TMC3Q7Z5M5 1100 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 TLCD1Q96CP7 247 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 RTFDC1Q9BY42 306 aaPredicted RBP17.66■□□□□ 0.42
CCDC59-201ENST00000256151 MTMR7Q9Y216 660 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 KRIT1O00522 736 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 PPFIA2O75334 1257 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 DNAJC8O75937 253 aaPredicted RBP17.66■□□□□ 0.42
CCDC59-201ENST00000256151 AFPP02771 609 aaKnown RBP17.66■□□□□ 0.42
CCDC59-201ENST00000256151 PLA2G4BP0C869 781 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 PDHBP11177 359 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 XRCC4Q13426 336 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 SLC4A8Q2Y0W8 1093 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 ALKBH5Q6P6C2 394 aaKnown RBP17.66■□□□□ 0.42
CCDC59-201ENST00000256151 RAPGEF5Q92565 580 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 TXLNGYQ9BZA5 131 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 VAT1LQ9HCJ6 419 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 DDX25Q9UHL0 483 aaKnown RBP17.66■□□□□ 0.42
CCDC59-201ENST00000256151 HDAC9Q9UKV0 1011 aa17.66■□□□□ 0.42
CCDC59-201ENST00000256151 GPR75-ASB3A0A0A6YYF3 556 aa17.65■□□□□ 0.42
CCDC59-201ENST00000256151 PNMA6FA0A0J9YX94 578 aa17.65■□□□□ 0.42
CCDC59-201ENST00000256151 USP17L5A8MUK1 530 aa17.65■□□□□ 0.42
CCDC59-201ENST00000256151 H2AFZP0C0S5 128 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms