RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 JAK3P52333 1124 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 GSDMDP57764 484 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 GNPTABQ3T906 1256 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 SCFD1Q8WVM8 642 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 PORCNQ9H237 461 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 TRMT1Q9NXH9 659 aaKnown RBP20.93■□□□□ 0.94
TRIM47-201ENST00000254816 PNMA3Q9UL41 463 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 MYH9P35579 1960 aaKnown RBP20.93■□□□□ 0.94
TRIM47-201ENST00000254816 ARHGEF35A5YM69 484 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 N4BP3O15049 544 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 NKRFO15226 690 aaKnown RBP eCLIP20.93■□□□□ 0.94
TRIM47-201ENST00000254816 EIF3JO75822 258 aaKnown RBP20.93■□□□□ 0.94
TRIM47-201ENST00000254816 FILIP1LQ4L180 1135 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 EEPD1Q7L9B9 569 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 ZNF710Q8N1W2 664 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 MMP19Q99542 508 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 ARID3AQ99856 593 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 EFCC1Q9HA90 598 aa20.93■□□□□ 0.94
TRIM47-201ENST00000254816 LRRC10BA6NIK2 292 aa20.92■□□□□ 0.94
TRIM47-201ENST00000254816 SFNP31947 248 aa20.92■□□□□ 0.94
TRIM47-201ENST00000254816 SPRYD7Q5W111 196 aa20.92■□□□□ 0.94
TRIM47-201ENST00000254816 ANKRD13CQ8N6S4 541 aa20.92■□□□□ 0.94
TRIM47-201ENST00000254816 PLXNB2O15031 1838 aa20.92■□□□□ 0.94
TRIM47-201ENST00000254816 ITGBL1O95965 494 aaPredicted RBP20.92■□□□□ 0.94
TRIM47-201ENST00000254816 MYBP10242 640 aa20.92■□□□□ 0.94
TRIM47-201ENST00000254816 ZNF746Q6NUN9 644 aaPredicted RBP20.92■□□□□ 0.94
TRIM47-201ENST00000254816 MAEAQ7L5Y9 396 aa20.92■□□□□ 0.94
TRIM47-201ENST00000254816 ANKRD20A12PQ8NF67 263 aa20.92■□□□□ 0.94
TRIM47-201ENST00000254816 ZNF592Q92610 1267 aa20.92■□□□□ 0.94
TRIM47-201ENST00000254816 CDHR1Q96JP9 859 aa20.92■□□□□ 0.94
TRIM47-201ENST00000254816 CNOT6LQ96LI5 555 aaKnown RBP20.92■□□□□ 0.94
TRIM47-201ENST00000254816 JPH1Q9HDC5 661 aaPredicted RBP20.92■□□□□ 0.94
TRIM47-201ENST00000254816 MAGEC2Q9UBF1 373 aaPredicted RBP20.92■□□□□ 0.94
TRIM47-201ENST00000254816 PLXNA1Q9UIW2 1896 aa20.91■□□□□ 0.94
TRIM47-201ENST00000254816 FAM13AO94988 1023 aa20.91■□□□□ 0.94
TRIM47-201ENST00000254816 YWHABP31946 246 aaKnown RBP20.91■□□□□ 0.94
TRIM47-201ENST00000254816 KCTD2Q14681 263 aa20.91■□□□□ 0.94
TRIM47-201ENST00000254816 UTP14CQ5TAP6 766 aaKnown RBP20.91■□□□□ 0.94
TRIM47-201ENST00000254816 SPECC1LQ69YQ0 1117 aa20.91■□□□□ 0.94
TRIM47-201ENST00000254816 NOC3LQ8WTT2 800 aaKnown RBP20.91■□□□□ 0.94
TRIM47-201ENST00000254816 FGD4Q96M96 766 aa20.91■□□□□ 0.94
TRIM47-201ENST00000254816 MRPL44Q9H9J2 332 aaKnown RBP20.91■□□□□ 0.94
TRIM47-201ENST00000254816 SLC9A2Q9UBY0 812 aa20.91■□□□□ 0.94
TRIM47-201ENST00000254816 PCDHA10Q9Y5I2 948 aa20.91■□□□□ 0.94
TRIM47-201ENST00000254816 EDNRBP24530 442 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 EEF1GP26641 437 aaKnown RBP20.9■□□□□ 0.94
TRIM47-201ENST00000254816 PSMC5P62195 406 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 PADI6Q6TGC4 694 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 CYFIP1Q7L576 1253 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 MYCT1Q8N699 235 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 GABBR1Q9UBS5 961 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 COL4A3BPQ9Y5P4 624 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 ARID2Q68CP9 1835 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 PRPF6O94906 941 aaKnown RBP20.9■□□□□ 0.94
TRIM47-201ENST00000254816 PBX1P40424 430 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 RARRES1P49788 294 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 LRRC63Q05C16 580 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 PLA2G4FQ68DD2 849 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 PTPN18Q99952 460 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 SENP7Q9BQF6 1050 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 NFASCO94856 1347 aa20.9■□□□□ 0.94
TRIM47-201ENST00000254816 PES1O00541 588 aaKnown RBP20.89■□□□□ 0.94
TRIM47-201ENST00000254816 HUNKP57058 714 aa20.89■□□□□ 0.94
TRIM47-201ENST00000254816 TBX2Q13207 712 aaPredicted RBP20.89■□□□□ 0.94
TRIM47-201ENST00000254816 C4orf19Q8IY42 314 aa20.89■□□□□ 0.94
TRIM47-201ENST00000254816 TSG101Q99816 390 aa20.89■□□□□ 0.94
TRIM47-201ENST00000254816 MROH8Q9H579 483 aa20.89■□□□□ 0.94
TRIM47-201ENST00000254816 BACH1O14867 736 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 HIP1RO75146 1068 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 LYPLA2O95372 231 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 GCNT3O95395 438 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 SFPQP23246 707 aaKnown RBP eCLIP20.89■□□□□ 0.93
TRIM47-201ENST00000254816 NMT1P30419 496 aaKnown RBP20.89■□□□□ 0.93
TRIM47-201ENST00000254816 ICAM3P32942 547 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 COPB2P35606 906 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 ACTR2P61160 394 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 ZCWPW2Q504Y3 356 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 CEP135Q66GS9 1140 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 CHADLQ6NUI6 762 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 SWSAP1Q6NVH7 229 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 ANKRD23Q86SG2 305 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 CCAR2Q8N163 923 aaKnown RBP20.89■□□□□ 0.93
TRIM47-201ENST00000254816 CCDC150Q8NCX0 1101 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 GPRC5AQ8NFJ5 357 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 TUBGCP2Q9BSJ2 902 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 KCTD10Q9H3F6 313 aa20.89■□□□□ 0.93
TRIM47-201ENST00000254816 DBR1Q9UK59 544 aaKnown RBP20.89■□□□□ 0.93
TRIM47-201ENST00000254816 DNAJC25-GNG10A0A024R161 153 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 HOXD13P35453 343 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 NPEPPSP55786 919 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 EPM2AIP1Q7L775 607 aaPredicted RBP20.88■□□□□ 0.93
TRIM47-201ENST00000254816 PARVGQ9HBI0 331 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 SOCS7O14512 581 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 USO1O60763 962 aaKnown RBP20.88■□□□□ 0.93
TRIM47-201ENST00000254816 ZBTB48P10074 688 aaPredicted RBP20.88■□□□□ 0.93
TRIM47-201ENST00000254816 GAP43P17677 238 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 MTIF2P46199 727 aaKnown RBP20.88■□□□□ 0.93
TRIM47-201ENST00000254816 UBXN1Q04323 297 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 KCNA1Q09470 495 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 LRRC55Q6ZSA7 311 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms