RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.52■□□□□ 0.56
ACTN4-201ENST00000252699 ZNF302Q9NR11 478 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 HOXA10P31260 410 aaPredicted RBP18.52■□□□□ 0.55
ACTN4-201ENST00000252699 SEMA3FQ13275 785 aa18.52■□□□□ 0.55
ACTN4-201ENST00000252699 CCDC14Q49A88 953 aa18.52■□□□□ 0.55
ACTN4-201ENST00000252699 SPOUT1Q5T280 376 aaKnown RBP18.52■□□□□ 0.55
ACTN4-201ENST00000252699 THNSL1Q8IYQ7 743 aa18.52■□□□□ 0.55
ACTN4-201ENST00000252699 TCP11Q8WWU5 503 aa18.52■□□□□ 0.55
ACTN4-201ENST00000252699 TYW1Q9NV66 732 aaKnown RBP18.52■□□□□ 0.55
ACTN4-201ENST00000252699 ESYT2A0FGR8 921 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 STK10O94804 968 aaKnown RBP18.51■□□□□ 0.55
ACTN4-201ENST00000252699 PPP2R5EQ16537 467 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 HACL1Q9UJ83 578 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 SALL1Q9NSC2 1324 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 NAALADL2Q58DX5 795 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 NAA35Q5VZE5 725 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 MRRFQ96E11 262 aaKnown RBP18.51■□□□□ 0.55
ACTN4-201ENST00000252699 STIM2Q9P246 746 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 DENND3A2RUS2 1198 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 SPDYE2BA6NHP3 402 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 RNF8O76064 485 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 EYA4O95677 639 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 SPDYE6P0CI01 402 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 MMP19Q99542 508 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 PODXL2Q9NZ53 605 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 RSPH14Q9UHP6 348 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 FAM205AQ6ZU69 1335 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 TEX33O43247 280 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 CTNND1O60716 968 aaKnown RBP18.51■□□□□ 0.55
ACTN4-201ENST00000252699 KCNH2Q12809 1159 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 BRD3Q15059 726 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 ACER1Q8TDN7 264 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 AGXT2Q9BYV1 514 aa18.51■□□□□ 0.55
ACTN4-201ENST00000252699 CAPN9O14815 690 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 TTLL4Q14679 1199 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 CPLX4Q7Z7G2 160 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 NBPF3Q9H094 633 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 CXCL9Q07325 125 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 MAPK6Q16659 721 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 PPP1R21Q6ZMI0 780 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 HPS3Q969F9 1004 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 CCDC97Q96F63 343 aaPredicted RBP18.5■□□□□ 0.55
ACTN4-201ENST00000252699 FAM193BQ96PV7 902 aaPredicted RBP18.5■□□□□ 0.55
ACTN4-201ENST00000252699 LRRC4BQ9NT99 713 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 CCDC89Q8N998 374 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 DDTLA6NHG4 134 aaPredicted RBP18.5■□□□□ 0.55
ACTN4-201ENST00000252699 VPS41P49754 854 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 TGFB2P61812 414 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 GRIN1Q05586 938 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 PSPC1Q8WXF1 523 aaKnown RBP18.5■□□□□ 0.55
ACTN4-201ENST00000252699 FBXO28Q9NVF7 368 aa18.5■□□□□ 0.55
ACTN4-201ENST00000252699 TBX3O15119 743 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 CLDN3O15551 220 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 CCDC144BQ3MJ40 725 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 ALKBH5Q6P6C2 394 aaKnown RBP18.49■□□□□ 0.55
ACTN4-201ENST00000252699 IVLP07476 585 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 GCLMP48507 274 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 SRGAP1Q7Z6B7 1085 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 RPF1Q9H9Y2 349 aaKnown RBP18.49■□□□□ 0.55
ACTN4-201ENST00000252699 PABPN1LA6NDY0 278 aaKnown RBP18.49■□□□□ 0.55
ACTN4-201ENST00000252699 LDHAP00338 332 aaKnown RBP18.49■□□□□ 0.55
ACTN4-201ENST00000252699 CD58P19256 250 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 SURF1Q15526 300 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 TUFT1Q9NNX1 390 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 NKIRAS1Q9NYS0 192 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 COPB2P35606 906 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 GUCY2FP51841 1108 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 PDLIM2Q96JY6 352 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 SLC9A2Q9UBY0 812 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.49■□□□□ 0.55
ACTN4-201ENST00000252699 PCDHA13Q9Y5I0 950 aa18.49■□□□□ 0.55
ACTN4-201ENST00000252699 NR3C2P08235 984 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 ECE1P42892 770 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 KRT81Q14533 505 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 RUFY4Q6ZNE9 571 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 SSX2IPQ9Y2D8 614 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 CAP2P40123 477 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 CATSPER4Q7RTX7 472 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 AGBL1Q96MI9 1066 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 HINFPQ9BQA5 517 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 ABHD10Q9NUJ1 306 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 DNAJC12Q9UKB3 198 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 FMN2Q9NZ56 1722 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 NFAT5O94916 1531 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 DPYDQ12882 1025 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 TRIM11Q96F44 468 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 SH2D3AQ9BRG2 576 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 JPH1Q9HDC5 661 aaPredicted RBP18.48■□□□□ 0.55
ACTN4-201ENST00000252699 TUBE1Q9UJT0 475 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 PHLPP2Q6ZVD8 1323 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 MOCS3O95396 460 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 IQCB1Q15051 598 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 NTRK3Q16288 839 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 MTRQ99707 1265 aa18.48■□□□□ 0.55
ACTN4-201ENST00000252699 GOLGA6CA6NDK9 693 aa18.47■□□□□ 0.55
ACTN4-201ENST00000252699 FTCDO95954 541 aa18.47■□□□□ 0.55
ACTN4-201ENST00000252699 GOLGA6DP0CG33 693 aa18.47■□□□□ 0.55
ACTN4-201ENST00000252699 ANKRD40Q6AI12 368 aa18.47■□□□□ 0.55
ACTN4-201ENST00000252699 DPH5Q9H2P9 285 aa18.47■□□□□ 0.55
ACTN4-201ENST00000252699 GOLGA6AQ9NYA3 693 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms