RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 COL1A2P08123 1366 aa28.31■■■□□ 2.12
LSM7-201ENST00000252622 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.3■■■□□ 2.12
LSM7-201ENST00000252622 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.3■■■□□ 2.12
LSM7-201ENST00000252622 ATP4AP20648 1035 aa28.3■■■□□ 2.12
LSM7-201ENST00000252622 MBTPS1Q14703 1052 aa28.3■■■□□ 2.12
LSM7-201ENST00000252622 RUFY4Q6ZNE9 571 aa28.3■■■□□ 2.12
LSM7-201ENST00000252622 MIER3Q7Z3K6 550 aa28.3■■■□□ 2.12
LSM7-201ENST00000252622 BBXQ8WY36 941 aaPredicted RBP28.3■■■□□ 2.12
LSM7-201ENST00000252622 ZNF484Q5JVG2 852 aa28.29■■■□□ 2.12
LSM7-201ENST00000252622 FAM26DQ5JW98 314 aa28.29■■■□□ 2.12
LSM7-201ENST00000252622 POTEDQ86YR6 584 aa28.29■■■□□ 2.12
LSM7-201ENST00000252622 FAM167AQ96KS9 214 aa28.29■■■□□ 2.12
LSM7-201ENST00000252622 VAV3Q9UKW4 847 aa28.29■■■□□ 2.12
LSM7-201ENST00000252622 BAIAP3O94812 1187 aa28.28■■■□□ 2.12
LSM7-201ENST00000252622 PPP2R5CQ13362 524 aa28.28■■■□□ 2.12
LSM7-201ENST00000252622 CNKSR3Q6P9H4 555 aa28.28■■■□□ 2.12
LSM7-201ENST00000252622 RSPH3Q86UC2 560 aa28.28■■■□□ 2.12
LSM7-201ENST00000252622 CKAP2LQ8IYA6 745 aa28.28■■■□□ 2.12
LSM7-201ENST00000252622 TRAPPC12Q8WVT3 735 aa28.28■■■□□ 2.12
LSM7-201ENST00000252622 HAS1Q92839 578 aa28.28■■■□□ 2.12
LSM7-201ENST00000252622 PCDHA2Q9Y5H9 948 aa28.28■■■□□ 2.12
LSM7-201ENST00000252622 ZBBXA8MT70 800 aa28.27■■■□□ 2.12
LSM7-201ENST00000252622 CTSHP09668 335 aa28.27■■■□□ 2.12
LSM7-201ENST00000252622 SLFN12Q8IYM2 578 aa28.27■■■□□ 2.12
LSM7-201ENST00000252622 SLC4A7Q9Y6M7 1214 aa28.27■■■□□ 2.12
LSM7-201ENST00000252622 SZT2Q5T011 3432 aa28.27■■■□□ 2.12
LSM7-201ENST00000252622 ZBTB42B2RXF5 422 aa28.26■■■□□ 2.11
LSM7-201ENST00000252622 FAM109BQ6ICB4 259 aaPredicted RBP28.26■■■□□ 2.11
LSM7-201ENST00000252622 MTHFD1LQ6UB35 978 aa28.26■■■□□ 2.11
LSM7-201ENST00000252622 TET1Q8NFU7 2136 aa28.26■■■□□ 2.11
LSM7-201ENST00000252622 CEP131Q9UPN4 1083 aa28.26■■■□□ 2.11
LSM7-201ENST00000252622 MYH9P35579 1960 aaKnown RBP28.25■■■□□ 2.11
LSM7-201ENST00000252622 ZNF862O60290 1169 aa28.25■■■□□ 2.11
LSM7-201ENST00000252622 MARCH6O60337 910 aa28.25■■■□□ 2.11
LSM7-201ENST00000252622 BAG4O95429 457 aaKnown RBP28.25■■■□□ 2.11
LSM7-201ENST00000252622 OATP04181 439 aa28.25■■■□□ 2.11
LSM7-201ENST00000252622 PRKCEQ02156 737 aa28.25■■■□□ 2.11
LSM7-201ENST00000252622 UGCGQ16739 394 aa28.25■■■□□ 2.11
LSM7-201ENST00000252622 DNAJB3Q8WWF6 145 aa28.25■■■□□ 2.11
LSM7-201ENST00000252622 ZBTB10Q96DT7 871 aa28.25■■■□□ 2.11
LSM7-201ENST00000252622 LAMA2P24043 3122 aaKnown RBP28.25■■■□□ 2.11
LSM7-201ENST00000252622 SMIM35A0A1B0GVV1 85 aa28.24■■■□□ 2.11
LSM7-201ENST00000252622 WNT7AO00755 349 aa28.24■■■□□ 2.11
LSM7-201ENST00000252622 NEMFO60524 1076 aa28.24■■■□□ 2.11
LSM7-201ENST00000252622 MGAT3Q09327 533 aa28.24■■■□□ 2.11
LSM7-201ENST00000252622 GNL2Q13823 731 aaKnown RBP28.24■■■□□ 2.11
LSM7-201ENST00000252622 NOSTRINQ8IVI9 506 aa28.24■■■□□ 2.11
LSM7-201ENST00000252622 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.24■■■□□ 2.11
LSM7-201ENST00000252622 KLRC1P26715 233 aa28.23■■■□□ 2.11
LSM7-201ENST00000252622 GJB2P29033 226 aa28.23■■■□□ 2.11
LSM7-201ENST00000252622 ORC2Q13416 577 aaPredicted RBP28.23■■■□□ 2.11
LSM7-201ENST00000252622 CALCRLQ16602 461 aa28.23■■■□□ 2.11
LSM7-201ENST00000252622 PLEKHG4Q58EX7 1191 aa28.23■■■□□ 2.11
LSM7-201ENST00000252622 SLC9A7Q96T83 725 aa28.23■■■□□ 2.11
LSM7-201ENST00000252622 FAM49AQ9H0Q0 323 aaPredicted RBP28.23■■■□□ 2.11
LSM7-201ENST00000252622 NRBP2Q9NSY0 501 aa28.23■■■□□ 2.11
LSM7-201ENST00000252622 WDR81Q562E7 1941 aa28.23■■■□□ 2.11
LSM7-201ENST00000252622 TMEM265A0A087WTH1 108 aa28.22■■■□□ 2.11
LSM7-201ENST00000252622 ABHD14A-ACY1A0A1B0GW23 586 aa28.22■■■□□ 2.11
LSM7-201ENST00000252622 KIF28PB7ZC32 967 aa28.22■■■□□ 2.11
LSM7-201ENST00000252622 EML1O00423 815 aa28.22■■■□□ 2.11
LSM7-201ENST00000252622 EFCAB14O75071 495 aa28.22■■■□□ 2.11
LSM7-201ENST00000252622 C22orf31O95567 290 aa28.22■■■□□ 2.11
LSM7-201ENST00000252622 CHRNA1P02708 482 aa28.22■■■□□ 2.11
LSM7-201ENST00000252622 U2AF2P26368 475 aaKnown RBP eCLIP28.22■■■□□ 2.11
LSM7-201ENST00000252622 MRPS6P82932 125 aaKnown RBP28.22■■■□□ 2.11
LSM7-201ENST00000252622 SPIRE1Q08AE8 756 aa28.22■■■□□ 2.11
LSM7-201ENST00000252622 PHOSPHO2Q8TCD6 241 aa28.22■■■□□ 2.11
LSM7-201ENST00000252622 SMC3Q9UQE7 1217 aa28.22■■■□□ 2.11
LSM7-201ENST00000252622 GRXCR1A8MXD5 290 aa28.21■■■□□ 2.11
LSM7-201ENST00000252622 ATP2A2P16615 1042 aaKnown RBP28.21■■■□□ 2.11
LSM7-201ENST00000252622 DNAJB2P25686 324 aa28.21■■■□□ 2.11
LSM7-201ENST00000252622 TRAPPC10P48553 1259 aa28.21■■■□□ 2.11
LSM7-201ENST00000252622 CUL4AQ13619 759 aa28.21■■■□□ 2.11
LSM7-201ENST00000252622 TCTN1Q2MV58 587 aa28.21■■■□□ 2.11
LSM7-201ENST00000252622 NME8Q8N427 588 aa28.21■■■□□ 2.11
LSM7-201ENST00000252622 DBF4BQ8NFT6 615 aa28.21■■■□□ 2.11
LSM7-201ENST00000252622 SEPT8Q92599 483 aa28.21■■■□□ 2.11
LSM7-201ENST00000252622 PBX4Q9BYU1 374 aa28.21■■■□□ 2.11
LSM7-201ENST00000252622 CDY2AQ9Y6F7 541 aa28.21■■■□□ 2.11
LSM7-201ENST00000252622 KCNJ6P48051 423 aa28.2■■■□□ 2.1
LSM7-201ENST00000252622 WDR5P61964 334 aaKnown RBP28.2■■■□□ 2.1
LSM7-201ENST00000252622 PSMC5P62195 406 aa28.2■■■□□ 2.1
LSM7-201ENST00000252622 IKBKEQ14164 716 aa28.2■■■□□ 2.1
LSM7-201ENST00000252622 EPHA7Q15375 998 aa28.2■■■□□ 2.1
LSM7-201ENST00000252622 RAB30Q15771 203 aa28.2■■■□□ 2.1
LSM7-201ENST00000252622 XKR3Q5GH77 459 aa28.2■■■□□ 2.1
LSM7-201ENST00000252622 ZNF697Q5TEC3 545 aa28.2■■■□□ 2.1
LSM7-201ENST00000252622 IER5Q5VY09 327 aa28.2■■■□□ 2.1
LSM7-201ENST00000252622 TRMT1LQ7Z2T5 733 aaKnown RBP28.2■■■□□ 2.1
LSM7-201ENST00000252622 DEFB123Q8N688 67 aa28.2■■■□□ 2.1
LSM7-201ENST00000252622 MTMR9Q96QG7 549 aa28.2■■■□□ 2.1
LSM7-201ENST00000252622 MAGEB2O15479 319 aa28.19■■■□□ 2.1
LSM7-201ENST00000252622 ATP2B1P20020 1258 aa28.19■■■□□ 2.1
LSM7-201ENST00000252622 Q7L0L9 218 aa28.19■■■□□ 2.1
LSM7-201ENST00000252622 BANK1Q8NDB2 785 aa28.19■■■□□ 2.1
LSM7-201ENST00000252622 APBB2Q92870 758 aa28.19■■■□□ 2.1
LSM7-201ENST00000252622 OSBPL7Q9BZF2 842 aa28.19■■■□□ 2.1
LSM7-201ENST00000252622 NOL7Q9UMY1 257 aaKnown RBP28.19■■■□□ 2.1
LSM7-201ENST00000252622 TRPV2Q9Y5S1 764 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms