RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 VEGFBP49765 207 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 ANO5Q75V66 913 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 TRIM50Q86XT4 487 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 MYRIPQ8NFW9 859 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 MORC4Q8TE76 937 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 LENG1Q96BZ8 264 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-201ENST00000244302 IKZF4Q9H2S9 585 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 SAMSN1Q9NSI8 373 aaKnown RBP14.38□□□□□ -0.11
HIF3A-201ENST00000244302 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-201ENST00000244302 GJD2Q9UKL4 321 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 BACH1O14867 736 aa14.37□□□□□ -0.11
HIF3A-201ENST00000244302 TRPA1O75762 1119 aa14.37□□□□□ -0.11
HIF3A-201ENST00000244302 STAM2O75886 525 aa14.37□□□□□ -0.11
HIF3A-201ENST00000244302 TXNP10599 105 aaKnown RBP14.37□□□□□ -0.11
HIF3A-201ENST00000244302 CASP5P51878 434 aa14.37□□□□□ -0.11
HIF3A-201ENST00000244302 KRT76Q01546 638 aa14.37□□□□□ -0.11
HIF3A-201ENST00000244302 ZNF658Q5TYW1 1059 aaPredicted RBP14.37□□□□□ -0.11
HIF3A-201ENST00000244302 ZNF746Q6NUN9 644 aaPredicted RBP14.37□□□□□ -0.11
HIF3A-201ENST00000244302 C1orf186Q6ZWK4 172 aa14.37□□□□□ -0.11
HIF3A-201ENST00000244302 ZSWIM4Q9H7M6 989 aa14.37□□□□□ -0.11
HIF3A-201ENST00000244302 GABRQQ9UN88 632 aa14.37□□□□□ -0.11
HIF3A-201ENST00000244302 CTNND2Q9UQB3 1225 aa14.37□□□□□ -0.11
HIF3A-201ENST00000244302 NFASCO94856 1347 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 BECN2A8MW95 431 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 NKRFO15226 690 aaKnown RBP eCLIP14.36□□□□□ -0.11
HIF3A-201ENST00000244302 YWHABP31946 246 aaKnown RBP14.36□□□□□ -0.11
HIF3A-201ENST00000244302 AMPD3Q01432 767 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 COASYQ13057 564 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 ABRAQ8N0Z2 381 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 PPP1R13LQ8WUF5 828 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 CCDC34Q96HJ3 373 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 NACC1Q96RE7 527 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 MAF1Q9H063 256 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 GPRC5CQ9NQ84 441 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 PANK4Q9NVE7 773 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 KRT18P05783 430 aaKnown RBP14.36□□□□□ -0.11
HIF3A-201ENST00000244302 EHHADHQ08426 723 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 NOGQ13253 232 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 NOLC1Q14978 699 aaKnown RBP eCLIP14.36□□□□□ -0.11
HIF3A-201ENST00000244302 UNC13DQ70J99 1090 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 KSR1Q8IVT5 923 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 TRIML1Q8N9V2 468 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 MLKLQ8NB16 471 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 GIMAP8Q8ND71 665 aaPredicted RBP14.36□□□□□ -0.11
HIF3A-201ENST00000244302 ZBTB10Q96DT7 871 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 CDHR1Q96JP9 859 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 TRIM47Q96LD4 638 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 SENP7Q9BQF6 1050 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 TINF2Q9BSI4 451 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 MLXIPQ9HAP2 919 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 MAGEF1Q9HAY2 307 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 EXOC1Q9NV70 894 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 TCEAL9Q9UHQ7 104 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 PCDHA2Q9Y5H9 948 aa14.36□□□□□ -0.11
HIF3A-201ENST00000244302 SLC15A5A6NIM6 579 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 ASB14A6NK59 587 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 RARRES1P49788 294 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 PSMC5P62195 406 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 MAP2K5Q13163 448 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 KCNB1Q14721 858 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 HERC4Q5GLZ8 1057 aaPredicted RBP14.35□□□□□ -0.11
HIF3A-201ENST00000244302 DAW1Q8N136 415 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 ADSSL1Q8N142 457 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 USP6NLQ92738 828 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 ZNF830Q96NB3 372 aaPredicted RBP14.35□□□□□ -0.11
HIF3A-201ENST00000244302 ZCCHC17Q9NP64 241 aaKnown RBP14.35□□□□□ -0.11
HIF3A-201ENST00000244302 LRRC37A2A6NM11 1700 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 PLXNA1Q9UIW2 1896 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 TNPO2O14787 897 aaKnown RBP14.35□□□□□ -0.11
HIF3A-201ENST00000244302 SUPT20HL2P0C7V6 817 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 MARK3P27448 753 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 GTF2F1P35269 517 aaKnown RBP eCLIP14.35□□□□□ -0.11
HIF3A-201ENST00000244302 PSMC4P43686 418 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 JAK3P52333 1124 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 KCNA1Q09470 495 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 CELF3Q5SZQ8 465 aaKnown RBP14.35□□□□□ -0.11
HIF3A-201ENST00000244302 PADI6Q6TGC4 694 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 NELFBQ8WX92 580 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 ZHX1Q9UKY1 873 aaPredicted RBP14.35□□□□□ -0.11
HIF3A-201ENST00000244302 NFE2L3Q9Y4A8 694 aa14.35□□□□□ -0.11
HIF3A-201ENST00000244302 USO1O60763 962 aaKnown RBP14.34□□□□□ -0.11
HIF3A-201ENST00000244302 ATG7O95352 703 aa14.34□□□□□ -0.11
HIF3A-201ENST00000244302 SMPD1P17405 629 aa14.34□□□□□ -0.11
HIF3A-201ENST00000244302 SFNP31947 248 aa14.34□□□□□ -0.11
HIF3A-201ENST00000244302 TCF7P36402 384 aaPredicted RBP14.34□□□□□ -0.11
HIF3A-201ENST00000244302 TRIM32Q13049 653 aa14.34□□□□□ -0.11
HIF3A-201ENST00000244302 DNTTIP2Q5QJE6 756 aaKnown RBP14.34□□□□□ -0.11
HIF3A-201ENST00000244302 SFR1Q86XK3 245 aa14.34□□□□□ -0.11
HIF3A-201ENST00000244302 SPATA33Q96N06 139 aa14.34□□□□□ -0.11
HIF3A-201ENST00000244302 GPR20Q99678 358 aa14.34□□□□□ -0.11
HIF3A-201ENST00000244302 BPIFA3Q9BQP9 254 aa14.34□□□□□ -0.11
HIF3A-201ENST00000244302 NAT10Q9H0A0 1025 aaKnown RBP14.34□□□□□ -0.11
HIF3A-201ENST00000244302 GOLGA6L19H0YKK7 550 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 MYL1P05976 194 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 PSAPP07602 524 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 PRKCEQ02156 737 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 ACVR2BQ13705 512 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 CCDC144BQ3MJ40 725 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 XKR9Q5GH70 373 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 METTL7BQ6UX53 244 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms