RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TNS3Q68CZ2 1445 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 ERVV-2B6SEH9 535 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 KIF28PB7ZC32 967 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 HNRNPCP07910 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
SPARC-201ENST00000231061 POTEJP0CG39 1038 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 HSD17B2P37059 387 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 METAP2P50579 478 aaKnown RBP eCLIP9.08□□□□□ -0.96
SPARC-201ENST00000231061 IKQ13123 557 aaPredicted RBP9.08□□□□□ -0.96
SPARC-201ENST00000231061 TCIRG1Q13488 830 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 GNA13Q14344 377 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 SLC9C2Q5TAH2 1124 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 CORO6Q6QEF8 472 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 MB21D2Q8IYB1 491 aaPredicted RBP9.08□□□□□ -0.96
SPARC-201ENST00000231061 SYNE4Q8N205 404 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 CCDC110Q8TBZ0 833 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 CNKSR1Q969H4 720 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 ABHD8Q96I13 439 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 UBE2OQ9C0C9 1292 aaKnown RBP9.08□□□□□ -0.96
SPARC-201ENST00000231061 PCDH18Q9HCL0 1135 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 TMOD3Q9NYL9 352 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 KIF1AQ12756 1690 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 RASSF10A6NK89 507 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 TTC34A8MYJ7 566 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 TMCC2O75069 709 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 ZNF202O95125 648 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 YEATS4O95619 227 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 GCLCP48506 637 aaPredicted RBP9.08□□□□□ -0.96
SPARC-201ENST00000231061 GSDMDP57764 484 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 ANTXR2P58335 489 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 MST1RQ04912 1400 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 C6orf183Q5T699 404 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 NUGGCQ68CJ6 796 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 BRAPQ7Z569 592 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 PPFIBP1Q86W92 1011 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 SYTL1Q8IYJ3 562 aa9.08□□□□□ -0.96
SPARC-201ENST00000231061 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.07□□□□□ -0.96
SPARC-201ENST00000231061 A0A1W2PQ27 194 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 A0A1W2PQ64 194 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 A0A1W2PQD8 194 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 KPNA6O60684 536 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 PFKFB1P16118 471 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 LMOD1P29536 600 aaPredicted RBP9.07□□□□□ -0.96
SPARC-201ENST00000231061 DNAJC10Q8IXB1 793 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 SYTL4Q96C24 671 aaPredicted RBP9.07□□□□□ -0.96
SPARC-201ENST00000231061 SEMA4AQ9H3S1 761 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 ATPIF1Q9UII2 106 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 DENND2AQ9ULE3 1009 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 EXOC7Q9UPT5 735 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 HPS5Q9UPZ3 1129 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 SPATA31A3Q5VYP0 1347 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 CCDC85CA6NKD9 419 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 UBL4AP11441 157 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 IL2RBP14784 551 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 SFPQP23246 707 aaKnown RBP eCLIP9.07□□□□□ -0.96
SPARC-201ENST00000231061 PBLDP30039 288 aaPredicted RBP9.07□□□□□ -0.96
SPARC-201ENST00000231061 SEC13P55735 322 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 KIF23Q02241 960 aaPredicted RBP9.07□□□□□ -0.96
SPARC-201ENST00000231061 SLC2A7Q6PXP3 512 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 CEP128Q6ZU80 1094 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 PHKBQ93100 1093 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 PFDN4Q9NQP4 134 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 TMED5Q9Y3A6 229 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 SMIM24O75264 130 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 TROVE2P10155 538 aaKnown RBP eCLIP9.07□□□□□ -0.96
SPARC-201ENST00000231061 PLTPP55058 493 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 CCZ1BP86790 482 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 CCZ1P86791 482 aaPredicted RBP9.07□□□□□ -0.96
SPARC-201ENST00000231061 IL31Q6EBC2 164 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 IQUBQ8NA54 791 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 PLIN2Q99541 437 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 ISCA1Q9BUE6 129 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 POLR3EQ9NVU0 708 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 CCPG1Q9ULG6 757 aa9.07□□□□□ -0.96
SPARC-201ENST00000231061 WDR17Q8IZU2 1322 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 B4E1Z4 1266 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 FOXP2O15409 715 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 ITGA6P23229 1130 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 WEE1P30291 646 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 SYKP43405 635 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 CETN1Q12798 172 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 CLUL1Q15846 466 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 BRDTQ58F21 947 aaPredicted RBP9.06□□□□□ -0.96
SPARC-201ENST00000231061 METTL11BQ5VVY1 283 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 STRA8Q7Z7C7 330 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 JAMLQ86YT9 394 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 CARNMT1Q8N4J0 409 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 BBOF1Q8ND07 529 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 DEPTORQ8TB45 409 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 MYL10Q9BUA6 226 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 KCTD10Q9H3F6 313 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 FKBP14Q9NWM8 211 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 ZNF142P52746 1687 aaPredicted RBP9.06□□□□□ -0.96
SPARC-201ENST00000231061 TRAV6A0A075B6T7 132 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 PRKACBP22694 351 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 PPP1R2P41236 205 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 MCAMP43121 646 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 SERPINB4P48594 390 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 PLCB4Q15147 1175 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 RCSD1Q6JBY9 416 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 PPP1R2P3Q6NXS1 205 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms