RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 RUNDC3BQ96NL0 473 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 NT5C3AQ9H0P0 336 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 MAGEF1Q9HAY2 307 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 EHD2Q9NZN4 543 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 UBE2Q2LH0YL09 131 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 IFNB1P01574 187 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 FGGP02679 453 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 CSF1RP07333 972 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 TROVE2P10155 538 aaKnown RBP eCLIP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 CYP2J2P51589 502 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 ZNF449Q6P9G9 518 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 NSMFQ6X4W1 530 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 USP37Q86T82 979 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 MIPOL1Q8TD10 442 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 KIFC2Q96AC6 838 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 RNPC3Q96LT9 517 aaKnown RBP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 DNAJC17Q9NVM6 304 aaKnown RBP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 MYOM1P52179 1685 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 A0A1W2PQC6 194 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 MYL1P05976 194 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 TMOD1P28289 359 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 EIF3BP55884 814 aaKnown RBP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 ARL6IP4Q66PJ3 421 aaKnown RBP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 ATG9AQ7Z3C6 839 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 SH3RF3Q8TEJ3 882 aaPredicted RBP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 EHD4Q9H223 541 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 RBM12Q9NTZ6 932 aaKnown RBP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 GGT7Q9UJ14 662 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 FBXL5Q9UKA1 691 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 ENO4A6NNW6 628 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 PHF20L1A8MW92 1017 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 BCRP11274 1271 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 CLUL1Q15846 466 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 CAPRIN2Q6IMN6 1127 aaKnown RBP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 PHLDB3Q6NSJ2 640 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 RSBN1LQ6PCB5 846 aaPredicted RBP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 SCYL3Q8IZE3 742 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 TSC22D3Q99576 134 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 RAB21Q9UL25 225 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 ATP2A2P16615 1042 aaKnown RBP12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 IREB2P48200 963 aaKnown RBP12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 PTPAQ15257 358 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 FOXP4Q8IVH2 680 aaPredicted RBP12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 CHMP6Q96FZ7 201 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 SYNCQ9H7C4 482 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 SLC40A1Q9NP59 571 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 PKD2L1Q9P0L9 805 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 BZW2Q9Y6E2 419 aaKnown RBP12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 MON2Q7Z3U7 1717 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 MAP2K7O14733 419 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 SLC10A5Q5PT55 438 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 PROCA1Q8NCQ7 364 aaPredicted RBP12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 CFAP61Q8NHU2 1237 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 AK8Q96MA6 479 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 LZTS2Q9BRK4 669 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 EHMT1Q9H9B1 1298 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 DUSP10Q9Y6W6 482 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 ITIH6Q6UXX5 1313 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 WDR19Q8NEZ3 1342 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 PASKQ96RG2 1323 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 POC1B-GALNT4F8VUJ3 575 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 TULP2O00295 520 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 PDHA1P08559 390 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 PDE6CP51160 858 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 DR1Q01658 176 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 STRIP1Q5VSL9 837 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 CYP4F22Q6NT55 531 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 SLC51AQ86UW1 340 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 CCHCR1Q8TD31 782 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 RIC8AQ9NPQ8 531 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 HPSEQ9Y251 543 aa12.5□□□□□ -0.41
DNMT3B-201ENST00000201963 CCDC188H7C350 402 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 DAPK3O43293 454 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 OPHN1O60890 802 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 GFPT2O94808 682 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 ACSL3O95573 720 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 ICA1Q05084 483 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 APBB1IPQ7Z5R6 666 aaPredicted RBP12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 KIRREL3Q8IZU9 778 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 LRRC8CQ8TDW0 803 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 SERPINB13Q9UIV8 391 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 KIAA1024Q9UPX6 916 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 ABCB5Q2M3G0 1257 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 USH1GQ495M9 461 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 FAM47EQ6ZV65 393 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 SLC44A5Q8NCS7 719 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 TBCKQ8TEA7 893 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 PLEKHG2Q9H7P9 1386 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 CYP2D6P10635 497 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 IL9RQ01113 521 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 DPYDQ12882 1025 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 TRAPPC11Q7Z392 1133 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 TEX2Q8IWB9 1127 aa12.49□□□□□ -0.41
DNMT3B-201ENST00000201963 RAB3IL1Q8TBN0 382 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms