RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 TMCO5AQ8N6Q1 288 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 CEP170P1Q96L14 293 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 FAM167BQ9BTA0 163 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 ARL4CP56559 192 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 DRP2Q13474 957 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 GPATCH4Q5T3I0 446 aaKnown RBP18.42■□□□□ 0.54
ITGB4-201ENST00000200181 LZICQ8WZA0 190 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 EMILIN3Q9NT22 766 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 STX18Q9P2W9 335 aaKnown RBP18.42■□□□□ 0.54
ITGB4-201ENST00000200181 STRIP2Q9ULQ0 834 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 MEIS1O00470 390 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 SERPINB2P05120 415 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 PNMA6AP0CW24 399 aaPredicted RBP18.42■□□□□ 0.54
ITGB4-201ENST00000200181 ARPP19P56211 112 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 NBPF10Q6P3W6 841 aaKnown RBP18.42■□□□□ 0.54
ITGB4-201ENST00000200181 GTSE1Q9NYZ3 720 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 SNX2O60749 519 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 TJP3O95049 919 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 ANXA13P27216 316 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 FBXO38Q6PIJ6 1188 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 RNF139Q8WU17 664 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 ZNF496Q96IT1 587 aaPredicted RBP18.42■□□□□ 0.54
ITGB4-201ENST00000200181 LRFN2Q9ULH4 789 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 TRIM33Q9UPN9 1127 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 KIAA0232Q92628 1395 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 ABCC4O15439 1325 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 CCNE1P24864 410 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 PMS1P54277 932 aaKnown RBP18.41■□□□□ 0.54
ITGB4-201ENST00000200181 PSMD2Q13200 908 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 KCTD2Q14681 263 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 UBE3CQ15386 1083 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 A0A087WWV3 80 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 RASA4BC9J798 803 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 RASA4O43374 803 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 BLVRAP53004 296 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 AP2B1P63010 937 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 TRIM60Q495X7 471 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 KRT39Q6A163 491 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 KIAA0825Q8IV33 1275 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 TBCKQ8TEA7 893 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 SLC8A2Q9UPR5 921 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 EDC4Q6P2E9 1401 aaKnown RBP18.41■□□□□ 0.54
ITGB4-201ENST00000200181 CCDC188H7C350 402 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 KITP10721 976 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 DDIT3P35638 169 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 BEND6Q5SZJ8 279 aaPredicted RBP18.41■□□□□ 0.54
ITGB4-201ENST00000200181 FAM47EQ6ZV65 393 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 PSMA2P25787 234 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 HADHAP40939 763 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 CYP27A1Q02318 531 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 TTLL7Q6ZT98 887 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 EPM2AIP1Q7L775 607 aaPredicted RBP18.41■□□□□ 0.54
ITGB4-201ENST00000200181 RNF103-CHMP3A0A140T963 221 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 SCARA5Q6ZMJ2 495 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 RHOT2Q8IXI1 618 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 TTLL11Q8NHH1 800 aa18.41■□□□□ 0.54
ITGB4-201ENST00000200181 HAUS5O94927 633 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 ZNF18P17022 549 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 KCNA1Q09470 495 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 MORF4L2Q15014 288 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 DOK7Q18PE1 504 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 NSUN7Q8NE18 718 aaKnown RBP18.4■□□□□ 0.54
ITGB4-201ENST00000200181 SUGT1Q9Y2Z0 365 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 CDO1Q16878 200 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 ARMCX2Q7L311 632 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 LRRC37BQ96QE4 947 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 WDR17Q8IZU2 1322 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 ARHGAP10A1A4S6 786 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 KRT38O76015 456 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
ITGB4-201ENST00000200181 CCDC92Q53HC0 331 aaPredicted RBP18.4■□□□□ 0.54
ITGB4-201ENST00000200181 SCG3Q8WXD2 468 aaKnown RBP18.4■□□□□ 0.54
ITGB4-201ENST00000200181 MTBPQ96DY7 904 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 OLFM3Q96PB7 478 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 ZNF711Q9Y462 761 aa18.4■□□□□ 0.54
ITGB4-201ENST00000200181 CCND2P30279 289 aa18.39■□□□□ 0.54
ITGB4-201ENST00000200181 COPS2P61201 443 aa18.39■□□□□ 0.54
ITGB4-201ENST00000200181 MRPS25P82663 173 aaKnown RBP18.39■□□□□ 0.54
ITGB4-201ENST00000200181 CHRNDQ07001 517 aa18.39■□□□□ 0.54
ITGB4-201ENST00000200181 ACTN3Q08043 901 aaPredicted RBP18.39■□□□□ 0.54
ITGB4-201ENST00000200181 LRRC24Q50LG9 513 aa18.39■□□□□ 0.54
ITGB4-201ENST00000200181 APOA5Q6Q788 366 aa18.39■□□□□ 0.54
ITGB4-201ENST00000200181 BTBD6Q96KE9 485 aa18.39■□□□□ 0.54
ITGB4-201ENST00000200181 NDST4Q9H3R1 872 aa18.39■□□□□ 0.54
ITGB4-201ENST00000200181 ARHGEF37A1IGU5 675 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 SERPINI2O75830 405 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 KIF23Q02241 960 aaPredicted RBP18.39■□□□□ 0.53
ITGB4-201ENST00000200181 NR1H3Q13133 447 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 KCTD1Q719H9 257 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 ANO5Q75V66 913 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 MB21D1Q8N884 522 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 PARVGQ9HBI0 331 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 CDV3Q9UKY7 258 aaKnown RBP18.39■□□□□ 0.53
ITGB4-201ENST00000200181 CCDC159P0C7I6 412 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 CCDC85BQ15834 202 aaPredicted RBP18.39■□□□□ 0.53
ITGB4-201ENST00000200181 ERICH1Q86X53 443 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 hCG_1984214I3L0E3 225 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 MMP1P03956 469 aa18.39■□□□□ 0.53
ITGB4-201ENST00000200181 AARSP49588 968 aaKnown RBP eCLIP18.39■□□□□ 0.53
ITGB4-201ENST00000200181 SURF1Q15526 300 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms