RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 SNUPNO95149 360 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 MOCS3O95396 460 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 BCRP11274 1271 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 KRT5P13647 590 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 GRIN1Q05586 938 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 ASPRV1Q53RT3 343 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 CPXCR1Q8N123 301 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 SUPT20HQ8NEM7 779 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 HAUS2Q9NVX0 235 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 MYH3P11055 1940 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 TBC1D8O95759 1140 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 KIF11P52732 1056 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 DOK7Q18PE1 504 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 GPATCH4Q5T3I0 446 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 ZC3H18Q86VM9 953 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 CCDC110Q8TBZ0 833 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 DDX12PQ92771 950 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 KRT12Q99456 494 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 SYNCQ9H7C4 482 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 EPB41L4AQ9HCS5 686 aaPredicted RBP13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 SERPINB13Q9UIV8 391 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 UBE2Q2LH0YL09 131 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 BACH1O14867 736 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 GAS7O60861 476 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 ATP2C1P98194 919 aaPredicted RBP13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 SP8Q8IXZ3 490 aa13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 NOVA2Q9UNW9 492 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-201ENST00000011898 ATP2A1O14983 1001 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 HEXIM1O94992 359 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 SRGNP10124 158 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 CDK8P49336 464 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 BIRC3Q13489 604 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 CRY2Q49AN0 593 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 FAM43BQ6ZT52 329 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 SLFN12Q8IYM2 578 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 SCYL3Q8IZE3 742 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 TC2NQ8N9U0 490 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 TMEM47Q9BQJ4 181 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 METTL14Q9HCE5 456 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 H2AFXP16104 143 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 SMTNP53814 917 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 CERKLQ49MI3 558 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 HSP90AA5PQ58FG0 334 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 MFSD4BQ5TF39 518 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 KCTD1Q719H9 257 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 ADAT2Q7Z6V5 191 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 CCDC105Q8IYK2 499 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 ELAC2Q9BQ52 826 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 COL4A3BPQ9Y5P4 624 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 A0A1B0GTH6 734 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 SLC8A3P57103 927 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 SRBD1Q8N5C6 995 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 FGD4Q96M96 766 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 DDX23Q9BUQ8 820 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 AGXT2Q9BYV1 514 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 ADAMTS1Q9UHI8 967 aa13.15□□□□□ -0.3
TSPAN9-201ENST00000011898 CNGA1P29973 690 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 IRAK1P51617 712 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 CROCCP2Q86T23 111 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 FBXO11Q86XK2 927 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 FAM178BQ8IXR5 827 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 TTLL6Q8N841 843 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 DYDC2Q96IM9 177 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 ZNF512BQ96KM6 892 aaPredicted RBP13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 FNBP1Q96RU3 617 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 SPON1Q9HCB6 807 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 PLCB1Q9NQ66 1216 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 SH3GLB2Q9NR46 395 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 PCDHA13Q9Y5I0 950 aa13.15□□□□□ -0.31
TSPAN9-201ENST00000011898 AP1G2O75843 785 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 TTLL1O95922 423 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 FTCDO95954 541 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 NAA35Q5VZE5 725 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 LRRC31Q6UY01 552 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 SDCCAG8Q86SQ7 713 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 RNF217Q8TC41 542 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 KIFAP3Q92845 792 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 SH2D4AQ9H788 454 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 ASIC3Q9UHC3 531 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 FXR1P51114 621 aaKnown RBP eCLIP13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 ICA1Q05084 483 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 LAMB3Q13751 1172 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 HHATQ5VTY9 493 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 ALS2CLQ60I27 953 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 SH3RF3Q8TEJ3 882 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 GPR101Q96P66 508 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 ADD3Q9UEY8 706 aaKnown RBP13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 GUCY1A3Q02108 690 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 NR1I3Q14994 352 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 PTPAQ15257 358 aa13.14□□□□□ -0.31
TSPAN9-201ENST00000011898 RAB17Q9H0T7 212 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms