RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Mrgprx1Q8CIP3 322 aa23.39■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Ddx39aQ8VDW0 427 aaKnown RBP23.39■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Fbxo33Q8VE08 562 aa23.39■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Nrbp2Q91V36 499 aa23.39■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Ggps1Q9WTN0 300 aa23.39■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Arhgef10lA2AWP8 1280 aa23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Per1O35973 1291 aa23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Pip4k2aO70172 405 aa23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 P4hbP09103 509 aaKnown RBP23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 TxnP10639 105 aaKnown RBP23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Etv6P97360 485 aa23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Specc1lQ2KN98 1118 aaKnown RBP23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Nab2Q61127 525 aa23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Tpd52Q62393 224 aa23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Ces1eQ64176 562 aa23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Cc2d1bQ8BRN9 848 aa23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Azin2Q8BVM4 459 aa23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Ano2Q8CFW1 1002 aa23.38■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Wfdc16A2A5H4 111 aa23.37■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Cyp11b2P15539 500 aa23.37■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Igbp1Q61249 340 aa23.37■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Mcph1Q7TT79 822 aa23.37■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Ipo5Q8BKC5 1097 aaKnown RBP23.37■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Arid5bQ8BM75 1188 aaKnown RBP23.37■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 CoasyQ9DBL7 563 aa23.37■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 AmfrQ9R049 643 aa23.37■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Sbf1Q6ZPE2 1867 aa23.37■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Mcm5P49718 733 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 CebpzP53569 1052 aaKnown RBP23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Rufy4Q3TYX8 563 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 E2f8Q58FA4 860 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Cfap52Q5F201 620 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Kiaa0391Q8JZY4 584 aaKnown RBP23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Znf445Q8R2V3 986 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Fgd4Q91ZT5 766 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Sucla2Q9Z2I9 463 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Knop1Q9Z2Q2 478 aaKnown RBP23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Gm11549A0A286YD83 63 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Eif3dO70194 548 aaKnown RBP23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Tpm2P58774 284 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 MaeaQ4VC33 396 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Armcx3Q8BHS6 379 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 3830417A13RikQ8BQJ2 303 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Btbd7Q8CFE5 1130 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Adcy3Q8VHH7 1145 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Prpf6Q91YR7 941 aaKnown RBP23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Tas1r3Q925D8 858 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Znf687Q9D2D7 1237 aa23.36■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Zc3h4Q6ZPZ3 1304 aaKnown RBP23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Abcb11Q9QY30 1321 aa23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 PrkceP16054 737 aa23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Bcat1P24288 386 aa23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Pbx1P41778 430 aa23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Nploc4P60670 608 aa23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 StamP70297 548 aa23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Trim43cP86449 446 aa23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Zbtb7bQ64321 544 aa23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Serpinb3dQ6UKZ0 387 aa23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Ddx41Q91VN6 622 aaKnown RBP23.35■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Krt28A6BLY7 462 aa23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Exoc4O35382 975 aa23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Nmt1O70310 496 aaKnown RBP23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Mindy4Q3UQI9 744 aa23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Tbx2Q60707 711 aa23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Fstl1Q62356 306 aa23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Hook2Q7TMK6 716 aa23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Nop9Q8BMC4 636 aaKnown RBP23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Ears2Q9CXJ1 523 aa23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Mis18aQ9CZJ6 204 aa23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Tbx20Q9ES03 445 aa23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Pex11aQ9Z211 246 aa23.34■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Magea4F2Z493 315 aa23.33■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Mov10P23249 1004 aaKnown RBP23.33■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 MafbP54841 323 aa23.33■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 NfiaQ02780 532 aa23.33■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Gm3414Q3TNU4 584 aa23.33■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Cdc37Q61081 379 aa23.33■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Cyp4f39Q8BGU0 532 aa23.33■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Kcnc4Q8R1C0 628 aa23.33■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Sorbs3Q9R1Z8 733 aa23.33■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Atad5Q4QY64 1826 aa23.33■■□□□ 1.33
Ccdc88a-202ENSMUST00000109477 Cd70O55237 195 aa23.33■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Prl2c3P04768 224 aa23.33■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Hoxc6P10629 235 aa23.33■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Tdp1Q8BJ37 609 aa23.33■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 March8Q9DBD2 286 aa23.33■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Add1Q9QYC0 735 aaKnown RBP23.33■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Col4a3Q9QZS0 1669 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ttll6A4Q9E8 822 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Ttll10A4Q9F3 704 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Prom1O54990 867 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Trdmt1O55055 415 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Axin2O88566 840 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Gna14P30677 355 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Pdrg1P59048 133 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Lpar1P61793 364 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Nucb2P81117 420 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Zfp90Q61967 636 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 Aoc2Q812C9 757 aa23.32■■□□□ 1.32
Ccdc88a-202ENSMUST00000109477 D130040H23RikQ8BII3 405 aa23.32■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms