RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Hsf3D0VYS2 492 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm5861F6VCN9 180 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Bmpr2O35607 1038 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 ChkaO54804 453 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Senp1P59110 640 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Fam83bQ0VBM2 1012 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Col19a1Q0VF58 1136 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Scarf1Q5ND28 820 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Galk2Q68FH4 458 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Aldh4a1Q8CHT0 562 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mettl16Q9CQG2 553 aaKnown RBP9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Abcb9Q9JJ59 762 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Myo1cQ9WTI7 1063 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 FpgtG5E8F4 590 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ido1P28776 407 aaKnown RBP9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Lrrn4P59383 733 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cct2P80314 535 aaKnown RBP9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ppp4cP97470 307 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Q3UUX7 111 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ece1Q4PZA2 769 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 St5Q924W7 1134 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Exo5Q9CXP9 373 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tor1bQ9ER41 336 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ccdc121E9Q6D3 323 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ces2bQ6PDB7 556 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Doc2aQ7TNF0 405 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 SympkQ80X82 1284 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Afap1l1Q8BZI0 768 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Slc13a3Q91Y63 600 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 GrhprQ91Z53 328 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Riok2Q9CQS5 547 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cxxc1Q9CWW7 660 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Etv5Q9CXC9 510 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ssu72Q9CY97 194 aaKnown RBP9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Fsip1Q9D3V5 435 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Slc52a2Q9D8F3 450 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tk2Q9R088 270 aa9.64□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rsbn1lD3Z0K6 821 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Akr1c19G3X9Y6 323 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Hddc2Q3SXD3 199 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Nxpe2Q3U095 558 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 EappQ5BU09 281 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pgm2l1Q8CAA7 621 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Q8CD60 292 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Slc35c2Q8VCX2 364 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Aim2Q91VJ1 354 aaKnown RBP9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ubxn11Q9D572 484 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ehd3Q9QXY6 535 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mapk7Q9WVS8 806 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm29276A0A087WNW5 222 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm21865A0A087WRL2 222 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm21996A0A087WSS9 222 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Fgd3O88842 733 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Olfm1O88998 485 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ppp3ccP48455 513 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gpc4P51655 557 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Spatc1Q148B6 480 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Zhx3Q8C0Q2 951 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Trpv3Q8K424 791 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Vps18Q8R307 973 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ppp1r16bQ8VHQ3 568 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Adck1Q9D0L4 525 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rhobtb1Q9DAK3 695 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ubtfl1Q3USZ2 394 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Lman1lQ8VCD3 505 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 NifkQ91VE6 317 aaKnown RBP9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pcdha10Q91Y20 946 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Bloc1s6Q9R0C0 172 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Arl3Q9WUL7 182 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Zfp853A0A1D5RM95 733 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm8879F6R3J9 157 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm8922F6XVS9 199 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm6460F6YJZ8 199 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm8871F7AXK2 190 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pip4k2aO70172 405 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Eno1P17182 434 aaKnown RBP9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rtkn2Q14B46 604 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cops7bQ8BV13 264 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mknk2Q8CDB0 459 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tp53bp2Q8CG79 1128 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Kcnq3Q8K3F6 873 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mtss1Q8R1S4 759 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 CalcbQ99MP3 130 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tpgs1Q99MS8 303 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 MajinQ9D992 256 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tubd1Q9R1K7 455 aa9.63□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Lrriq4A6H6A4 596 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Hsbp1l1B2RXB2 72 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Kcnb1Q03717 857 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Nt5c2Q3V1L4 560 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tnfaip2Q61333 691 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 TfrcQ62351 763 aaKnown RBP9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Camta2Q80Y50 1208 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Dnajc22Q8CHS2 339 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Zmat5Q9CQR5 170 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cby3Q9CVN6 235 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Arhgef25Q9CWR0 618 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Hic2Q9JLZ6 619 aaKnown RBP9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm7682A0A0J9YUM1 481 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ccdc175E9PVB3 822 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms