RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Sept2P42208 361 aaKnown RBP10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Psd3Q2PFD7 1037 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Erich4Q3UNU4 136 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 E2f5Q61502 335 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Krt31Q61765 416 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Hoxa13Q62424 386 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Nr2e1Q64104 385 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ccdc25Q78PG9 208 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 BlmhQ8R016 455 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Sgms1Q8VCQ6 419 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Atp6v0a4Q920R6 833 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Nup188Q6ZQH8 1759 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Nova2D3YVV7 556 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Mroh8E9PYI4 1049 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Gm8298J3QPI0 401 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Rnaseh1O70338 285 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 VimP20152 466 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Gna14P30677 355 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Senp1P59110 640 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Wdhd1P59328 1117 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Sox13Q04891 613 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Tatdn3Q3U1C6 294 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Slc30a9Q5IRJ6 567 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Rassf10Q8BL43 508 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Pym1Q8CHP5 203 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Tbx22Q8K402 517 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Prpf4Q9DAW6 521 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Slc26a4Q9R155 780 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Kat6bQ8BRB7 1872 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Wdr72D3YYM4 1114 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Pja1O55176 578 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 H2afzP0C0S6 128 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Xrcc6P23475 608 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Hspa9P38647 679 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 H2afvQ3THW5 128 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Fbxw10Q5SUS0 1030 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Lilrb4Q64281 335 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Znf18Q810A1 556 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Snip1Q8BIZ6 383 aaKnown RBP10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Gpr180Q8BPS4 441 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Strip1Q8C079 837 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Bhmt2Q91WS4 363 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Fam111aQ9D2L9 613 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Capn15Q9JLG8 1095 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Stat2Q9WVL2 923 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Osbpl9A2A8Z1 736 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Tnfrsf11aO35305 625 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Pcdha4O88689 947 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Agxt2Q3UEG6 513 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Clul1Q3ZRW6 464 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Atp13a4Q5XF90 1193 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Acad11Q80XL6 779 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Armc6Q8BNU0 468 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 P3h4Q8K2B0 443 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Bud13Q8R149 637 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Slc35f6Q8VE96 372 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Fam187aQ9D3R5 417 aa10.68□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Fbf1A2A870 1173 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Fam71aB7XG49 585 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 AoahO35298 574 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Atp8a1P70704 1164 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ccdc33Q3ULW6 985 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Krt15Q61414 452 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 IgflQ6B9Z0 140 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Srrm3Q80WV7 648 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Fam228aQ8CDW1 299 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Calml4Q91WQ9 153 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Dqx1Q924H9 718 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Krt36B1AQ75 473 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 TyrobpO54885 114 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Nmt1O70310 496 aaKnown RBP10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Becn2P0DM65 447 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Art2aP17981 287 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Lig3P97386 1015 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Znf367Q0VDT2 340 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Chrna5Q2MKA5 467 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Dph6Q9CQ28 267 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 PpihQ9D868 188 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Arhgef7Q9ES28 862 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ptf1aQ9QX98 324 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Vav3Q9R0C8 847 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Gm45261A0A1B0GSP6 197 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 MagohP61327 146 aaKnown RBP10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Epha7Q61772 998 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Tm4sf1Q64302 202 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Fgd5Q80UZ0 1219 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ccdc186Q8C9S4 917 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Lrit1Q8K099 624 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 MagohbQ9CQL1 146 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ssr1Q9CY50 286 aaKnown RBP10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Pramef12Q9D2F1 463 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Capn12Q9ER56 720 aa10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Togaram1Q6A070 1776 aaKnown RBP10.67□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Arhgap33Q80YF9 1305 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Lbhd1A0A087WPA0 259 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Gsg1l2M0QWL6 290 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Mcm5P49718 733 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Pkn1P70268 946 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Meis2P97367 477 aa10.66□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Acot6Q32Q92 419 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms