RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Tsc2Q61037 1814 aa20.77■□□□□ 0.92
Ccdc50-201ENSMUST00000039443 Nme9A0A1L1SUL6 329 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Trappc11B2RXC1 1133 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Clcn6O35454 870 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Trappc3O55013 180 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Nedd4P46935 887 aaKnown RBP20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Fbxw10Q5SUS0 1030 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Ppp2r5eQ61151 467 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Haus6Q6NV99 933 aaKnown RBP20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Onecut3Q8K557 490 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 VillQ91YD6 859 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Psma8Q9CWH6 250 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 1700109H08RikQ9D9C0 210 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 NapaQ9DB05 295 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Gm14525B1AZA0 212 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Gm2012B1B0R1 212 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Nf2P46662 596 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Rpl13P47963 211 aaKnown RBP20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Hps5P59438 1126 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Klra9Q2TJJ8 266 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Gm14819Q62478 212 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Gja3Q64448 417 aa20.76■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Ap1m1P35585 423 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Specc1Q5SXY1 1067 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Hdac10Q6P3E7 666 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Actn1Q7TPR4 892 aaKnown RBP20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Pja2Q80U04 707 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Fgd5Q80UZ0 1219 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Strip1Q8C079 837 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 CbsQ91WT9 561 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Q91Z58 1206 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 PccaQ91ZA3 724 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 ArpinQ9D0A3 226 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Fam173bQ9D1Z3 247 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Ap1b1O35643 943 aaKnown RBP20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Grem2O88273 168 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Nlrp2Q4PLS0 1046 aaKnown RBP20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 E2f5Q61502 335 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Pank4Q80YV4 820 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Tarsl2Q8BLY2 790 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Dr1Q91WV0 176 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Vav3Q9R0C8 847 aa20.75■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Spocd1B1ASB6 936 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Ces1aE9PYP1 563 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Chmp6P0C0A3 200 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Nedd1P33215 660 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 NfixP70257 488 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Trim43cP86449 446 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Rasip1Q3U0S6 961 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Scnn1aQ61180 699 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Epha7Q61772 998 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 GmipQ6PGG2 971 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Fmnl3Q6ZPF4 1028 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 DcakdQ8BHC4 231 aaKnown RBP20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 IarsQ8BU30 1262 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 PdxkQ8K183 312 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Lgi2Q8K4Z0 550 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 4930550L24RikQ99PA7 320 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Rexo2Q9D8S4 237 aa20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Add1Q9QYC0 735 aaKnown RBP20.74■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Ccdc78D3Z5T1 437 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Esr2O08537 530 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Wfs1P56695 890 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Zc3h18Q0P678 948 aaKnown RBP20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Dhx37Q6NZL1 1150 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Dpp8Q80YA7 892 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Ece2Q80Z60 881 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Chtf18Q8BIW9 969 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Gpcpd1Q8C0L9 675 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Ildr2B5TVM2 661 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Mroh9G5E8L9 891 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Mpp3O88910 568 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 HnrnpdQ60668 355 aaKnown RBP20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Lilrb4Q64281 335 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Zdhhc24Q6IR37 284 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Cacnb1Q8R3Z5 597 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 ParnQ8VDG3 624 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Chn1Q91V57 459 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Tsnaxip1Q99P25 704 aa20.73■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Scgb2b7D3YYY1 112 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Polr2fP61219 127 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Shox2P70390 331 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Rbm46P86049 533 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Gdpd4Q3TT99 632 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Krt35Q497I4 455 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Oxr1Q4KMM3 866 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Lrig3Q6P1C6 1117 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Atxn2lQ7TQH0 1049 aaKnown RBP20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Dennd2aQ8C4S8 1000 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Gramd4Q8CB44 633 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Ces1Q8VCC2 565 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Sept14Q9DA97 430 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 PigoQ9JJI6 1093 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 EmcnQ9R0H2 261 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Zfp646Q6NV66 1788 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Cfap70D3YVL2 1141 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Kif5cP28738 956 aaKnown RBP20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Ercc5P35689 1170 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 Krt15Q61414 452 aa20.72■□□□□ 0.91
Ccdc50-201ENSMUST00000039443 GnptabQ69ZN6 1235 aa20.72■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 77 ms