RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Vmn2r71L7N2D8 855 aa10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 IkbkgO88522 412 aa10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 P4hbP09103 509 aaKnown RBP10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ftl1P29391 183 aa10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Slc9a1Q61165 820 aa10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Stx12Q9ER00 274 aa10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 IdeQ9JHR7 1019 aa10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Lrrc32G3XA59 663 aa10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nmt2O70311 529 aa10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Casp8O89110 480 aa10.71□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nck2O55033 380 aa10.71□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Stx2Q00262 289 aa10.71□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Zbtb16Q3UQ17 673 aa10.71□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Stxbp2Q64324 593 aa10.71□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Tmc4Q7TQ65 694 aa10.71□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gpr150Q8BL07 427 aa10.71□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Fsd1lQ8BYN5 507 aa10.71□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Stap2Q8R0L1 411 aa10.71□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Abhd2Q9QXM0 425 aa10.71□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Large1Q9Z1M7 756 aa10.71□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ttc13A0A1L1SSC7 844 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gja8P28236 440 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ap5z1Q3U829 807 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gucy2fQ5SDA5 1108 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Vav2Q60992 868 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 AdalQ80SY6 360 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Impg2Q80XH2 1243 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Arhgap18Q8K0Q5 663 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Col23a1Q8K4G2 532 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cttnbp2nlQ99LJ0 638 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Slc13a1Q9JHI4 594 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Arhgef10lA2AWP8 1280 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Psmd14O35593 310 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rgs9O54828 675 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Dnajb6O54946 365 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Hmx1O70218 332 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cap1P40124 474 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Mcl1P97287 331 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Palb2Q3U0P1 1104 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Xxylt1Q3U4G3 392 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rgl1Q60695 768 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cnot7Q60809 285 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 LnpkQ7TQ95 425 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ms4a5Q810P8 197 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ccdc169Q8BXX9 214 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Trappc12Q8K2L8 797 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 HscbQ8K3A0 234 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Sf3a3Q9D554 501 aaKnown RBP10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rfwd2Q9R1A8 733 aaKnown RBP10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Fem1bQ9Z2G0 627 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Nup62clA2AG10 272 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 JrklB2RRL2 523 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ccdc24E9PUW8 296 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 En2P09066 324 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rab20P35295 233 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 IvlP48997 467 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rassf6Q80UQ2 353 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Scfd2Q8BTY8 684 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Spata32Q8C5V0 334 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Kdm8Q9CXT6 414 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Taf1dQ9D4V4 322 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ddx25Q9QY15 484 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Bcl9lQ67FY2 1494 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Fyb2A2A995 729 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Apol8A2VDH7 339 aaKnown RBP10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Dnaaf5B9EJR8 853 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Vmn2r79E9Q067 851 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rnaseh1O70338 285 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 D1Pas1P16381 660 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Dpcr1Q3TNW5 500 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Sh3gl3Q62421 347 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 GmipQ6PGG2 971 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Tlr13Q6R5N8 991 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Olfr119Q7TRJ5 321 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cep85Q8BMK0 761 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Arhgap29Q8CGF1 1266 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Pcdhb2Q91Y00 799 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Srgap2Q91Z67 1071 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 4921530L21RikQ9CQ47 274 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 AticQ9CWJ9 592 aaKnown RBP10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 CoasyQ9DBL7 563 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 ArcQ9WV31 396 aa10.7□□□□□ -0.7
Ldlr-201ENSMUST00000034713 GpiP06745 558 aaKnown RBP10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 MybP06876 636 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 AgtP11859 477 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rpusd2Q149F1 553 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Q3UJP5 209 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Olfr121Q5CZY0 321 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Mpp4Q6P7F1 635 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Lrrc41Q8K1C9 807 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ranbp17Q99NF8 1088 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Mageb16Q9CWV4 363 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 ArpinQ9D0A3 226 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Itga2bQ9QUM0 1033 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ubxn8Q9QZ49 277 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Prkab1Q9R078 270 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Noc2lQ9WV70 747 aaKnown RBP10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Casq2O09161 415 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Mmp14P53690 582 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Irx2P81066 474 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms