RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Cyfip2Q5SQX6 1253 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 StilQ60988 1262 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Papd7Q6PB75 542 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 PigsQ6PD26 555 aaKnown RBP13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 OtoaQ8K561 1137 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Dnajc28Q8VCE1 385 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Rabgef1Q9JM13 491 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Cul1Q9WTX6 776 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Entpd5Q9WUZ9 427 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Plekhg2Q6KAU7 1340 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 MetP16056 1379 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Ankrd63A2ARS0 390 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Ttc38A3KMP2 465 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Mucl2P02815 138 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Mgat1P27808 447 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Kif5aP33175 1027 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Cacnb3P54285 484 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 B4galnt4Q766D5 1034 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Ccdc40Q8BI79 1192 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Cbwd1Q8VEH6 393 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 StambpQ9CQ26 424 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Tmem192Q9CXT7 266 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 IdeQ9JHR7 1019 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Fmnl1Q9JL26 1094 aa13.81□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Apba1B2RUJ5 842 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Vmn2r79E9Q067 851 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Jdp2P97875 163 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Mettl14Q3UIK4 456 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Cracr2aQ3UP38 310 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 BcrQ6PAJ1 1270 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Foxo6Q70KY4 559 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 SugctQ7TNE1 436 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 MymkQ9D1N4 221 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Sdr42e1Q9D665 394 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Dnajc7Q9QYI3 494 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Tmed2Q9R0Q3 201 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Ank1Q02357 1862 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Sall1Q9ER74 1322 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Gm6583E9Q8Z1 469 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Chil3O35744 398 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Casp14O89094 257 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Kcna1P16388 495 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Pde1bQ01065 535 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Zbtb16Q3UQ17 673 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Cct8l1Q80YT3 562 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 AopepQ8BXQ6 817 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 HmcesQ8R1M0 353 aaKnown RBP13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Eif3hQ91WK2 352 aaKnown RBP13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Plagl2Q925T4 496 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Tmco5aQ9D9D5 303 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Gm3127E9Q9P5 263 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Gm3453K7N724 263 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Ftl1P29391 183 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 SpertQ32MG2 446 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Appl2Q8K3G9 662 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 McamQ8R2Y2 648 aaKnown RBP13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 SufuQ9Z0P7 484 aa13.8□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Cfap221A9Q751 836 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 AgtP11859 477 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Tspyl5Q69ZB3 406 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Mmgt1Q8K273 131 aaKnown RBP13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Alpk1Q9CXB8 1231 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Fsip1Q9D3V5 435 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Mss51Q9D5Z5 446 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Cog1Q9Z160 980 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Pdha1P35486 390 aaKnown RBP13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Palb2Q3U0P1 1104 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Rgl1Q60695 768 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 PrimpolQ6P1E7 537 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Sirt2Q8VDQ8 389 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Ulk4Q3V129 1303 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Frmd7A2AD83 703 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Ccdc13D3YV10 709 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Tmem35bQ3U0Y2 150 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Nsrp1Q5NCR9 542 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Shisa4Q8CA71 197 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Sox30Q8CGW4 782 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Bud13Q8R149 637 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Xirp1O70373 1129 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Pcdha4O88689 947 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Gna14P30677 355 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Dab2P98078 766 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Ttbk2Q3UVR3 1243 aa13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 NemfQ8CCP0 1064 aaKnown RBP13.79□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Scgb2b11A0A087WR49 112 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 DgkkE9Q7N4 1118 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Cbfa2t2O70374 594 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Atf2P16951 487 aaKnown RBP13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Gja8P28236 440 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Cetn1P41209 172 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Hcls1P49710 486 aaKnown RBP13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Krt31Q61765 416 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Adck2Q6NSR3 617 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 L3mbtl3Q8BLB7 883 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Ero1aQ8R180 464 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Wbp11Q923D5 641 aaKnown RBP13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 4931423N10RikQ9D4J9 382 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 ThegQ9JMB1 375 aa13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Pabpc1lA2A5N3 607 aaKnown RBP13.78□□□□□ -0.2
Clcn3-201ENSMUST00000004430 Bfsp1A2AMT1 669 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms