RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C SRN2Q99176 213 aa2.48□□□□□ -2.01
DNL4YOR005C YLR462WO13556 202 aa2.48□□□□□ -2.01
DNL4YOR005C SCEIP03882 235 aa2.48□□□□□ -2.01
DNL4YOR005C ADE4P04046 510 aaKnown RBP2.48□□□□□ -2.01
DNL4YOR005C MAK32P23060 363 aa2.48□□□□□ -2.01
DNL4YOR005C MRPL25P23369 157 aa2.48□□□□□ -2.01
DNL4YOR005C PET18P25362 215 aa2.48□□□□□ -2.01
DNL4YOR005C COY1P34237 679 aa2.48□□□□□ -2.01
DNL4YOR005C YUH1P35127 236 aa2.48□□□□□ -2.01
DNL4YOR005C ATP3P38077 311 aaKnown RBP2.48□□□□□ -2.01
DNL4YOR005C TCM62P38228 572 aaKnown RBP2.48□□□□□ -2.01
DNL4YOR005C YHL049CP38722 271 aa2.48□□□□□ -2.01
DNL4YOR005C UBA4P38820 440 aa2.48□□□□□ -2.01
DNL4YOR005C STN1P38960 494 aa2.48□□□□□ -2.01
DNL4YOR005C EXO1P39875 702 aa2.48□□□□□ -2.01
DNL4YOR005C YEL075CP39972 122 aa2.48□□□□□ -2.01
DNL4YOR005C LCP5P40079 357 aaPredicted RBP2.48□□□□□ -2.01
DNL4YOR005C YER189WP40104 122 aa2.48□□□□□ -2.01
DNL4YOR005C YFL064CP43540 174 aa2.48□□□□□ -2.01
DNL4YOR005C TOS3P43637 560 aa2.48□□□□□ -2.01
DNL4YOR005C FMP33P46998 180 aa2.48□□□□□ -2.01
DNL4YOR005C MIG2P53035 382 aa2.48□□□□□ -2.01
DNL4YOR005C ESBP6P53918 673 aa2.48□□□□□ -2.01
DNL4YOR005C LGE1Q02796 332 aaKnown RBP2.48□□□□□ -2.01
DNL4YOR005C DIG1Q03063 452 aaKnown RBP2.48□□□□□ -2.01
DNL4YOR005C PFA5Q03289 374 aa2.48□□□□□ -2.01
DNL4YOR005C EKI1Q03764 534 aa2.48□□□□□ -2.01
DNL4YOR005C SMA2Q04658 369 aa2.48□□□□□ -2.01
DNL4YOR005C ATG26Q06321 1198 aa2.48□□□□□ -2.01
DNL4YOR005C YDL057WQ07379 328 aa2.48□□□□□ -2.01
DNL4YOR005C THP1Q08231 455 aa2.48□□□□□ -2.01
DNL4YOR005C GET4Q12125 312 aa2.48□□□□□ -2.01
DNL4YOR005C YBL111CQ3E7Y5 667 aa2.48□□□□□ -2.01
DNL4YOR005C YER145C-AA0A023PYF4 145 aa2.47□□□□□ -2.01
DNL4YOR005C GAS1P22146 559 aaKnown RBP2.47□□□□□ -2.01
DNL4YOR005C RHB1P25378 209 aa2.47□□□□□ -2.01
DNL4YOR005C THI80P35202 319 aa2.47□□□□□ -2.01
DNL4YOR005C YBR032WP38223 100 aa2.47□□□□□ -2.01
DNL4YOR005C FES1P38260 290 aa2.47□□□□□ -2.01
DNL4YOR005C GPI16P38875 610 aa2.47□□□□□ -2.01
DNL4YOR005C DIM1P41819 318 aaKnown RBP2.47□□□□□ -2.01
DNL4YOR005C YFR018CP43599 363 aa2.47□□□□□ -2.01
DNL4YOR005C TMA20P89886 181 aaPredicted RBP2.47□□□□□ -2.01
DNL4YOR005C YKR005CQ02203 525 aa2.47□□□□□ -2.01
DNL4YOR005C INM2Q05533 292 aa2.47□□□□□ -2.01
DNL4YOR005C ULA1Q12059 462 aa2.47□□□□□ -2.01
DNL4YOR005C ISY1P21374 235 aaPredicted RBP2.47□□□□□ -2.01
DNL4YOR005C SPS22P25380 463 aa2.47□□□□□ -2.01
DNL4YOR005C EFB1P32471 206 aaKnown RBP2.47□□□□□ -2.01
DNL4YOR005C PRP21P32524 280 aaPredicted RBP2.47□□□□□ -2.01
DNL4YOR005C DUG2P38149 878 aa2.47□□□□□ -2.01
DNL4YOR005C ERV46P39727 415 aa2.47□□□□□ -2.01
DNL4YOR005C YRB1P41920 201 aaKnown RBP2.47□□□□□ -2.01
DNL4YOR005C LAM5P43560 674 aa2.47□□□□□ -2.01
DNL4YOR005C ASN1P49089 572 aaKnown RBP2.47□□□□□ -2.01
DNL4YOR005C LSC1P53598 329 aaKnown RBP2.47□□□□□ -2.01
DNL4YOR005C CWC21Q03375 135 aaKnown RBP2.47□□□□□ -2.01
DNL4YOR005C FMN1Q03778 218 aa2.47□□□□□ -2.01
DNL4YOR005C YLR297WQ05899 129 aa2.47□□□□□ -2.01
DNL4YOR005C APC5Q08683 685 aa2.47□□□□□ -2.01
DNL4YOR005C DSE3Q08729 430 aa2.47□□□□□ -2.01
DNL4YOR005C BRR1Q99177 341 aaPredicted RBP2.47□□□□□ -2.01
DNL4YOR005C CLN3P13365 580 aa2.46□□□□□ -2.01
DNL4YOR005C HOM2P13663 365 aaKnown RBP2.46□□□□□ -2.01
DNL4YOR005C EXO70P19658 623 aa2.46□□□□□ -2.01
DNL4YOR005C RPC19P28000 142 aaKnown RBP2.46□□□□□ -2.01
DNL4YOR005C EMP70P32802 667 aa2.46□□□□□ -2.01
DNL4YOR005C RPT5P33297 434 aaKnown RBP2.46□□□□□ -2.01
DNL4YOR005C MSN2P33748 704 aa2.46□□□□□ -2.01
DNL4YOR005C DBP7P36120 742 aaKnown RBP2.46□□□□□ -2.01
DNL4YOR005C BNA4P38169 460 aa2.46□□□□□ -2.01
DNL4YOR005C SPC97P38863 823 aa2.46□□□□□ -2.01
DNL4YOR005C END3P39013 349 aa2.46□□□□□ -2.01
DNL4YOR005C PDS1P40316 373 aaPredicted RBP2.46□□□□□ -2.01
DNL4YOR005C SNG1P46950 547 aa2.46□□□□□ -2.01
DNL4YOR005C RBL2P48606 106 aaKnown RBP2.46□□□□□ -2.01
DNL4YOR005C SMA1Q02651 245 aa2.46□□□□□ -2.01
DNL4YOR005C RPM2Q02773 1202 aa2.46□□□□□ -2.01
DNL4YOR005C SNU56Q03782 492 aaKnown RBP2.46□□□□□ -2.01
DNL4YOR005C KRE28Q04431 385 aa2.46□□□□□ -2.01
DNL4YOR005C DIB1Q06819 143 aaPredicted RBP2.46□□□□□ -2.01
DNL4YOR005C NSE1Q07913 336 aa2.46□□□□□ -2.01
DNL4YOR005C YLR049CQ12110 428 aa2.46□□□□□ -2.01
DNL4YOR005C RIM15P43565 1770 aa2.46□□□□□ -2.02
DNL4YOR005C FIG2P25653 1609 aa2.46□□□□□ -2.02
DNL4YOR005C PGK1P00560 416 aaKnown RBP2.46□□□□□ -2.02
DNL4YOR005C SAM1P10659 382 aaKnown RBP2.46□□□□□ -2.02
DNL4YOR005C NUP1P20676 1076 aa2.46□□□□□ -2.02
DNL4YOR005C DPB2P24482 689 aaPredicted RBP2.46□□□□□ -2.02
DNL4YOR005C HCM1P25364 564 aa2.46□□□□□ -2.02
DNL4YOR005C ATP11P32453 318 aa2.46□□□□□ -2.02
DNL4YOR005C AST1P35183 429 aa2.46□□□□□ -2.02
DNL4YOR005C HIS2P38635 335 aa2.46□□□□□ -2.02
DNL4YOR005C MNL1P38888 796 aa2.46□□□□□ -2.02
DNL4YOR005C GAT2P40209 560 aa2.46□□□□□ -2.02
DNL4YOR005C SAS2P40963 338 aa2.46□□□□□ -2.02
DNL4YOR005C STB1P42845 420 aa2.46□□□□□ -2.02
DNL4YOR005C TAX4P47030 604 aa2.46□□□□□ -2.02
DNL4YOR005C YJR011CP47086 261 aaPredicted RBP2.46□□□□□ -2.02
DNL4YOR005C ROG1P53118 685 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms