RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W HER2Q03557 464 aa4.5□□□□□ -1.69
RRP40YOL142W ARO80Q04052 950 aa4.5□□□□□ -1.69
RRP40YOL142W PRM6Q04705 352 aa4.5□□□□□ -1.69
RRP40YOL142W SOV1Q04748 898 aa4.5□□□□□ -1.69
RRP40YOL142W DAS2Q12084 232 aa4.5□□□□□ -1.69
RRP40YOL142W HRT3Q12347 344 aa4.5□□□□□ -1.69
RRP40YOL142W GCN4P03069 281 aa4.49□□□□□ -1.69
RRP40YOL142W DFR1P07807 211 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
RRP40YOL142W MAS1P10507 462 aa4.49□□□□□ -1.69
RRP40YOL142W MET8P15807 274 aa4.49□□□□□ -1.69
RRP40YOL142W EBP2P36049 427 aaKnown RBP4.49□□□□□ -1.69
RRP40YOL142W MUM2P38236 366 aa4.49□□□□□ -1.69
RRP40YOL142W YBR225WP38321 900 aa4.49□□□□□ -1.69
RRP40YOL142W TCD1P38756 429 aa4.49□□□□□ -1.69
RRP40YOL142W YHR131CP38835 850 aa4.49□□□□□ -1.69
RRP40YOL142W SHO1P40073 367 aa4.49□□□□□ -1.69
RRP40YOL142W SEC9P40357 651 aa4.49□□□□□ -1.69
RRP40YOL142W SNZ3P43545 298 aa4.49□□□□□ -1.69
RRP40YOL142W HOP2P53187 214 aa4.49□□□□□ -1.69
RRP40YOL142W SNZ2P53824 298 aa4.49□□□□□ -1.69
RRP40YOL142W IRC15Q02733 499 aa4.49□□□□□ -1.69
RRP40YOL142W ERV41Q04651 352 aa4.49□□□□□ -1.69
RRP40YOL142W YDR278CQ05612 105 aa4.49□□□□□ -1.69
RRP40YOL142W TAF10Q12030 206 aa4.49□□□□□ -1.69
RRP40YOL142W SPE3Q12074 293 aaKnown RBP4.49□□□□□ -1.69
RRP40YOL142W BEM2P39960 2167 aaKnown RBP4.48□□□□□ -1.69
RRP40YOL142W JIP3O13555 125 aa4.48□□□□□ -1.69
RRP40YOL142W COR1P07256 457 aa4.48□□□□□ -1.69
RRP40YOL142W PUT4P15380 627 aa4.48□□□□□ -1.69
RRP40YOL142W GYP6P32806 458 aa4.48□□□□□ -1.69
RRP40YOL142W RCK2P38623 610 aa4.48□□□□□ -1.69
RRP40YOL142W HAT2P39984 401 aa4.48□□□□□ -1.69
RRP40YOL142W BTN2P53286 410 aa4.48□□□□□ -1.69
RRP40YOL142W GPI1P53306 609 aa4.48□□□□□ -1.69
RRP40YOL142W RBS1Q05672 457 aaKnown RBP4.48□□□□□ -1.69
RRP40YOL142W VPS74Q06385 345 aa4.48□□□□□ -1.69
RRP40YOL142W DDC1Q08949 612 aa4.48□□□□□ -1.69
RRP40YOL142W ATR1P13090 542 aa4.47□□□□□ -1.69
RRP40YOL142W HSC82P15108 705 aaKnown RBP4.47□□□□□ -1.69
RRP40YOL142W SRB2P34162 210 aa4.47□□□□□ -1.69
RRP40YOL142W BLI1P35727 113 aa4.47□□□□□ -1.69
RRP40YOL142W HIS2P38635 335 aa4.47□□□□□ -1.69
RRP40YOL142W YER189WP40104 122 aa4.47□□□□□ -1.69
RRP40YOL142W ALG8P40351 577 aa4.47□□□□□ -1.69
RRP40YOL142W MOB1P40484 314 aa4.47□□□□□ -1.69
RRP40YOL142W MET28P40573 187 aa4.47□□□□□ -1.69
RRP40YOL142W PET130P47065 347 aa4.47□□□□□ -1.69
RRP40YOL142W BOR1P53838 576 aa4.47□□□□□ -1.69
RRP40YOL142W GYL1Q04322 720 aa4.47□□□□□ -1.69
RRP40YOL142W AIM32Q04689 311 aa4.47□□□□□ -1.69
RRP40YOL142W YPQ1Q12010 308 aa4.47□□□□□ -1.69
RRP40YOL142W EMP46Q12396 444 aa4.47□□□□□ -1.69
RRP40YOL142W EXO70P19658 623 aa4.46□□□□□ -1.7
RRP40YOL142W CKI1P20485 582 aa4.46□□□□□ -1.7
RRP40YOL142W MRE11P32829 692 aa4.46□□□□□ -1.7
RRP40YOL142W MFT1P33441 392 aaKnown RBP4.46□□□□□ -1.7
RRP40YOL142W TUL1P36096 758 aa4.46□□□□□ -1.7
RRP40YOL142W MBB1P39534 108 aa4.46□□□□□ -1.7
RRP40YOL142W AVT2P39981 480 aa4.46□□□□□ -1.7
RRP40YOL142W YEL057CP39983 233 aa4.46□□□□□ -1.7
RRP40YOL142W YJL132WP47014 750 aa4.46□□□□□ -1.7
RRP40YOL142W BRO1P48582 844 aa4.46□□□□□ -1.7
RRP40YOL142W KAP114P53067 1004 aa4.46□□□□□ -1.7
RRP40YOL142W SXM1Q04175 944 aaKnown RBP4.46□□□□□ -1.7
RRP40YOL142W TAF9Q05027 157 aa4.46□□□□□ -1.7
RRP40YOL142W APC5Q08683 685 aa4.46□□□□□ -1.7
RRP40YOL142W MES1P00958 751 aaKnown RBP4.45□□□□□ -1.7
RRP40YOL142W CBS2P14905 389 aa4.45□□□□□ -1.7
RRP40YOL142W GLK1P17709 500 aaKnown RBP4.45□□□□□ -1.7
RRP40YOL142W OCA4P25366 362 aa4.45□□□□□ -1.7
RRP40YOL142W PUT3P25502 979 aaPredicted RBP4.45□□□□□ -1.7
RRP40YOL142W DBF4P32325 704 aa4.45□□□□□ -1.7
RRP40YOL142W AVT5P38176 459 aa4.45□□□□□ -1.7
RRP40YOL142W ECM13P38195 257 aa4.45□□□□□ -1.7
RRP40YOL142W SWC5P38326 303 aa4.45□□□□□ -1.7
RRP40YOL142W RRT2P38332 387 aa4.45□□□□□ -1.7
RRP40YOL142W PCA1P38360 1216 aa4.45□□□□□ -1.7
RRP40YOL142W TIF5P38431 405 aaKnown RBP4.45□□□□□ -1.7
RRP40YOL142W LCP5P40079 357 aaPredicted RBP4.45□□□□□ -1.7
RRP40YOL142W BTT1P40314 149 aaPredicted RBP4.45□□□□□ -1.7
RRP40YOL142W IDP2P41939 412 aa4.45□□□□□ -1.7
RRP40YOL142W RMD8P43620 662 aa4.45□□□□□ -1.7
RRP40YOL142W TIM10P87108 93 aa4.45□□□□□ -1.7
RRP40YOL142W PIR3Q03180 325 aa4.45□□□□□ -1.7
RRP40YOL142W MFB1Q04922 465 aa4.45□□□□□ -1.7
RRP40YOL142W SML1Q04964 104 aa4.45□□□□□ -1.7
RRP40YOL142W VAC14Q06708 880 aa4.45□□□□□ -1.7
RRP40YOL142W YLL056CQ12177 298 aa4.45□□□□□ -1.7
RRP40YOL142W RKM5Q12367 367 aa4.45□□□□□ -1.7
RRP40YOL142W RRD2Q12461 358 aa4.45□□□□□ -1.7
RRP40YOL142W YLR462WO13556 202 aa4.44□□□□□ -1.7
RRP40YOL142W RAD10P06838 210 aa4.44□□□□□ -1.7
RRP40YOL142W PET123P17558 318 aa4.44□□□□□ -1.7
RRP40YOL142W TRX1P22217 103 aaKnown RBP4.44□□□□□ -1.7
RRP40YOL142W PPH22P23595 377 aa4.44□□□□□ -1.7
RRP40YOL142W PEX34P25584 144 aa4.44□□□□□ -1.7
RRP40YOL142W YHL049CP38722 271 aa4.44□□□□□ -1.7
RRP40YOL142W CAJ1P39101 391 aa4.44□□□□□ -1.7
RRP40YOL142W ERP2P39704 215 aa4.44□□□□□ -1.7
RRP40YOL142W YIL054WP40524 105 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms