RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	TEF4	P36008	412 aa	Known RBP	13.55	□□□□□ -0.24
SHR5	YOL110W	TUL1	P36096	758 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	AUR1	P36107	401 aa	Predicted RBP	13.55	□□□□□ -0.24
SHR5	YOL110W	MTG2	P38860	518 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	UME6	P39001	836 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	FMP52	P40008	231 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	THO1	P40040	218 aa	Known RBP	13.55	□□□□□ -0.24
SHR5	YOL110W	MPM1	P40364	252 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	YGR201C	P42936	225 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	GPI8	P49018	411 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	YAT1	P80235	687 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	YDR239C	Q03780	787 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	KRE28	Q04431	385 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	YMR226C	Q05016	267 aa	Known RBP	13.55	□□□□□ -0.24
SHR5	YOL110W	YPR097W	Q06839	1073 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	GUP2	Q08929	609 aa		13.55	□□□□□ -0.24
SHR5	YOL110W	NUF2	P33895	451 aa		13.54	□□□□□ -0.24
SHR5	YOL110W	BIG1	P38813	335 aa		13.54	□□□□□ -0.24
SHR5	YOL110W	ALR2	P43553	858 aa		13.54	□□□□□ -0.24
SHR5	YOL110W	RSC9	Q03124	581 aa		13.54	□□□□□ -0.24
SHR5	YOL110W	DCI1	Q08558	271 aa		13.54	□□□□□ -0.24
SHR5	YOL110W	RSA1	Q08932	381 aa		13.54	□□□□□ -0.24
SHR5	YOL110W	BSC1	Q12140	328 aa		13.54	□□□□□ -0.24
SHR5	YOL110W	ATR1	P13090	542 aa		13.53	□□□□□ -0.24
SHR5	YOL110W	RER1	P25560	188 aa		13.53	□□□□□ -0.24
SHR5	YOL110W	MXR2	P25566	168 aa		13.53	□□□□□ -0.24
SHR5	YOL110W	YIM1	P28625	365 aa		13.53	□□□□□ -0.24
SHR5	YOL110W	KAP122	P32767	1081 aa		13.53	□□□□□ -0.24
SHR5	YOL110W	GDH2	P33327	1092 aa	Known RBP	13.53	□□□□□ -0.24
SHR5	YOL110W	RPS27A	P35997	82 aa	Known RBP	13.53	□□□□□ -0.24
SHR5	YOL110W	RPS27B	P38711	82 aa		13.53	□□□□□ -0.24
SHR5	YOL110W	TRR2	P38816	342 aa		13.53	□□□□□ -0.24
SHR5	YOL110W	SPG5	P42933	373 aa		13.53	□□□□□ -0.24
SHR5	YOL110W	YGR266W	P53326	701 aa		13.53	□□□□□ -0.24
SHR5	YOL110W	RIM13	Q03792	727 aa		13.53	□□□□□ -0.24
SHR5	YOL110W	DTD1	Q07648	150 aa	Known RBP	13.53	□□□□□ -0.24
SHR5	YOL110W	RPL40A	P0CH08	128 aa	Known RBP	13.52	□□□□□ -0.25
SHR5	YOL110W	RPL40B	P0CH09	128 aa	Known RBP	13.52	□□□□□ -0.25
SHR5	YOL110W	APN1	P22936	367 aa		13.52	□□□□□ -0.25
SHR5	YOL110W	UBC8	P28263	218 aa		13.52	□□□□□ -0.25
SHR5	YOL110W	VPS51	P36116	164 aa		13.52	□□□□□ -0.25
SHR5	YOL110W	RSF1	Q05043	376 aa		13.52	□□□□□ -0.25
SHR5	YOL110W	SWA2	Q06677	668 aa		13.52	□□□□□ -0.25
SHR5	YOL110W	LOT6	Q07923	191 aa		13.52	□□□□□ -0.25
SHR5	YOL110W	TSC13	Q99190	310 aa		13.52	□□□□□ -0.25
SHR5	YOL110W	HFA1	P32874	2273 aa		13.51	□□□□□ -0.25
SHR5	YOL110W	POL4	P25615	582 aa		13.51	□□□□□ -0.25
SHR5	YOL110W	PEP12	P32854	288 aa		13.51	□□□□□ -0.25
SHR5	YOL110W	BET3	P36149	193 aa		13.51	□□□□□ -0.25
SHR5	YOL110W	FAR7	P43592	221 aa		13.51	□□□□□ -0.25
SHR5	YOL110W	AAD10	P47182	288 aa		13.51	□□□□□ -0.25
SHR5	YOL110W	TWF1	P53250	332 aa		13.51	□□□□□ -0.25
SHR5	YOL110W	YPR091C	Q06833	770 aa		13.51	□□□□□ -0.25
SHR5	YOL110W	AI4	P03878	556 aa		13.5	□□□□□ -0.25
SHR5	YOL110W	PTR2	P32901	601 aa		13.5	□□□□□ -0.25
SHR5	YOL110W	LOT5	P34234	306 aa		13.5	□□□□□ -0.25
SHR5	YOL110W	HCS1	P34243	683 aa		13.5	□□□□□ -0.25
SHR5	YOL110W	GIP2	P40036	548 aa		13.5	□□□□□ -0.25
SHR5	YOL110W	YFL066C	P43538	392 aa		13.5	□□□□□ -0.25
SHR5	YOL110W	ROM1	P53046	1155 aa		13.5	□□□□□ -0.25
SHR5	YOL110W	TPP1	Q03796	238 aa		13.5	□□□□□ -0.25
SHR5	YOL110W	RAD30	Q04049	632 aa		13.5	□□□□□ -0.25
SHR5	YOL110W	ARO10	Q06408	635 aa		13.5	□□□□□ -0.25
SHR5	YOL110W	CDC4	P07834	779 aa		13.49	□□□□□ -0.25
SHR5	YOL110W	AAC3	P18238	307 aa		13.49	□□□□□ -0.25
SHR5	YOL110W	TEC1	P18412	486 aa		13.49	□□□□□ -0.25
SHR5	YOL110W	CTR86	P25355	563 aa		13.49	□□□□□ -0.25
SHR5	YOL110W	YIL152W	P40455	235 aa		13.49	□□□□□ -0.25
SHR5	YOL110W	GVP36	P40531	326 aa	Known RBP	13.49	□□□□□ -0.25
SHR5	YOL110W	JHD2	P47156	728 aa	Predicted RBP	13.49	□□□□□ -0.25
SHR5	YOL110W	ASK10	P48361	1146 aa		13.49	□□□□□ -0.25
SHR5	YOL110W	SNP1	Q00916	300 aa	Predicted RBP	13.49	□□□□□ -0.25
SHR5	YOL110W	YPR172W	Q06608	200 aa		13.49	□□□□□ -0.25
SHR5	YOL110W	REH1	Q06709	432 aa		13.49	□□□□□ -0.25
SHR5	YOL110W	MRX4	Q12467	430 aa		13.49	□□□□□ -0.25
SHR5	YOL110W	DCG1	P32460	244 aa		13.48	□□□□□ -0.25
SHR5	YOL110W	WBP1	P33767	430 aa	Known RBP	13.48	□□□□□ -0.25
SHR5	YOL110W	FES1	P38260	290 aa		13.48	□□□□□ -0.25
SHR5	YOL110W	MET28	P40573	187 aa		13.48	□□□□□ -0.25
SHR5	YOL110W	YPL107W	Q02873	248 aa		13.48	□□□□□ -0.25
SHR5	YOL110W	NAT4	Q04751	285 aa		13.48	□□□□□ -0.25
SHR5	YOL110W	YPR174C	Q06616	221 aa	Predicted RBP	13.48	□□□□□ -0.25
SHR5	YOL110W	YIL046W-A	Q3E7Z4	54 aa		13.48	□□□□□ -0.25
SHR5	YOL110W	YHR210C	P38893	341 aa		13.47	□□□□□ -0.25
SHR5	YOL110W	ICE2	P40499	491 aa		13.47	□□□□□ -0.25
SHR5	YOL110W	BNA3	P47039	444 aa	Known RBP	13.47	□□□□□ -0.25
SHR5	YOL110W	BRR2	P32639	2163 aa	Known RBP	13.47	□□□□□ -0.25
SHR5	YOL110W	CBS1	P14066	229 aa		13.46	□□□□□ -0.25
SHR5	YOL110W	SEC2	P17065	759 aa		13.46	□□□□□ -0.25
SHR5	YOL110W	THR1	P17423	357 aa	Known RBP	13.46	□□□□□ -0.25
SHR5	YOL110W	YAR028W	P39548	234 aa		13.46	□□□□□ -0.25
SHR5	YOL110W	VPS52	P39904	641 aa		13.46	□□□□□ -0.25
SHR5	YOL110W	ALB1	P47019	175 aa	Predicted RBP	13.46	□□□□□ -0.25
SHR5	YOL110W	RNH70	P53331	553 aa		13.46	□□□□□ -0.25
SHR5	YOL110W	SMA2	Q04658	369 aa		13.46	□□□□□ -0.25
SHR5	YOL110W	ENT2	Q05785	613 aa		13.46	□□□□□ -0.25
SHR5	YOL110W	YOR365C	Q08844	703 aa		13.46	□□□□□ -0.25
SHR5	YOL110W	RHO1	P06780	209 aa	Known RBP	13.45	□□□□□ -0.26
SHR5	YOL110W	PET9	P18239	318 aa	Known RBP	13.45	□□□□□ -0.26
SHR5	YOL110W	FAR1	P21268	830 aa		13.45	□□□□□ -0.26

Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms