RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W DBP2P24783 546 aaKnown RBP5.76□□□□□ -1.49
CAF40YNL288W SPB1P25582 841 aaPredicted RBP5.76□□□□□ -1.49
CAF40YNL288W CMK1P27466 446 aaKnown RBP5.76□□□□□ -1.49
CAF40YNL288W ATP7P30902 174 aa5.76□□□□□ -1.49
CAF40YNL288W ZIP1P31111 875 aa5.76□□□□□ -1.49
CAF40YNL288W DGR2P32330 852 aa5.76□□□□□ -1.49
CAF40YNL288W YMC1P32331 307 aa5.76□□□□□ -1.49
CAF40YNL288W SSE1P32589 693 aaKnown RBP5.76□□□□□ -1.49
CAF40YNL288W SEC17P32602 292 aa5.76□□□□□ -1.49
CAF40YNL288W CAT2P32796 670 aaKnown RBP5.76□□□□□ -1.49
CAF40YNL288W DOA1P36037 715 aa5.76□□□□□ -1.49
CAF40YNL288W MRPL17P36528 281 aa5.76□□□□□ -1.49
CAF40YNL288W FZO1P38297 855 aa5.76□□□□□ -1.49
CAF40YNL288W IMA5P40884 581 aa5.76□□□□□ -1.49
CAF40YNL288W GAB1P41733 394 aa5.76□□□□□ -1.49
CAF40YNL288W ELP2P42935 788 aa5.76□□□□□ -1.49
CAF40YNL288W UPF3P48412 387 aaKnown RBP5.76□□□□□ -1.49
CAF40YNL288W DIA3P52290 468 aa5.76□□□□□ -1.49
CAF40YNL288W NNF2P53253 936 aa5.76□□□□□ -1.49
CAF40YNL288W COG2P53271 262 aa5.76□□□□□ -1.49
CAF40YNL288W ERG13P54839 491 aaKnown RBP5.76□□□□□ -1.49
CAF40YNL288W APC4Q04601 652 aa5.76□□□□□ -1.49
CAF40YNL288W DYN3Q04949 312 aa5.76□□□□□ -1.49
CAF40YNL288W YHC1Q05900 231 aaKnown RBP5.76□□□□□ -1.49
CAF40YNL288W SSQ1Q05931 657 aaPredicted RBP5.76□□□□□ -1.49
CAF40YNL288W SNX3Q08826 162 aaKnown RBP5.76□□□□□ -1.49
CAF40YNL288W YPR202WQ08993 238 aa5.76□□□□□ -1.49
CAF40YNL288W YPL066WQ12194 479 aa5.76□□□□□ -1.49
CAF40YNL288W RPN6Q12377 434 aa5.76□□□□□ -1.49
CAF40YNL288W YKL018C-AQ3E7A7 99 aa5.76□□□□□ -1.49
CAF40YNL288W ARG81P05085 880 aa5.75□□□□□ -1.49
CAF40YNL288W RIP1P08067 215 aa5.75□□□□□ -1.49
CAF40YNL288W TOP3P13099 656 aa5.75□□□□□ -1.49
CAF40YNL288W DAP2P18962 818 aa5.75□□□□□ -1.49
CAF40YNL288W PWP1P21304 576 aaKnown RBP5.75□□□□□ -1.49
CAF40YNL288W IDH2P28241 369 aaKnown RBP5.75□□□□□ -1.49
CAF40YNL288W CTS1P29029 562 aa5.75□□□□□ -1.49
CAF40YNL288W UGP1P32861 499 aaKnown RBP5.75□□□□□ -1.49
CAF40YNL288W TOD6P34219 525 aa5.75□□□□□ -1.49
CAF40YNL288W MNN2P38069 597 aa5.75□□□□□ -1.49
CAF40YNL288W IST2P38250 946 aa5.75□□□□□ -1.49
CAF40YNL288W RPL10P41805 221 aaKnown RBP5.75□□□□□ -1.49
CAF40YNL288W TIM54P47045 478 aa5.75□□□□□ -1.49
CAF40YNL288W TRM9P49957 279 aa5.75□□□□□ -1.49
CAF40YNL288W YMR010WQ03687 405 aa5.75□□□□□ -1.49
CAF40YNL288W HSP31Q04432 237 aa5.75□□□□□ -1.49
CAF40YNL288W RSF1Q05043 376 aa5.75□□□□□ -1.49
CAF40YNL288W COS7Q07788 383 aa5.75□□□□□ -1.49
CAF40YNL288W YLL007CQ07799 665 aa5.75□□□□□ -1.49
CAF40YNL288W YEH1Q07804 573 aa5.75□□□□□ -1.49
CAF40YNL288W TEN1Q07921 160 aa5.75□□□□□ -1.49
CAF40YNL288W THP2O13539 261 aaKnown RBP5.74□□□□□ -1.49
CAF40YNL288W UNG1P12887 359 aa5.74□□□□□ -1.49
CAF40YNL288W PMR1P13586 950 aa5.74□□□□□ -1.49
CAF40YNL288W VPS33P20795 691 aa5.74□□□□□ -1.49
CAF40YNL288W DEP1P31385 405 aa5.74□□□□□ -1.49
CAF40YNL288W CDC12P32468 407 aaKnown RBP5.74□□□□□ -1.49
CAF40YNL288W SSO1P32867 290 aa5.74□□□□□ -1.49
CAF40YNL288W ROT2P38138 954 aa5.74□□□□□ -1.49
CAF40YNL288W TRM5P38793 499 aa5.74□□□□□ -1.49
CAF40YNL288W RGI1P40043 161 aaPredicted RBP5.74□□□□□ -1.49
CAF40YNL288W FAU1P40099 211 aa5.74□□□□□ -1.49
CAF40YNL288W YJL043WP47053 257 aa5.74□□□□□ -1.49
CAF40YNL288W YGR266WP53326 701 aa5.74□□□□□ -1.49
CAF40YNL288W RSM10Q03201 203 aa5.74□□□□□ -1.49
CAF40YNL288W YDR476CQ03362 224 aa5.74□□□□□ -1.49
CAF40YNL288W RQC1Q05468 723 aaKnown RBP5.74□□□□□ -1.49
CAF40YNL288W BCP1Q06338 283 aa5.74□□□□□ -1.49
CAF40YNL288W YOL159CQ08300 171 aa5.74□□□□□ -1.49
CAF40YNL288W GPN2Q08726 347 aaPredicted RBP5.74□□□□□ -1.49
CAF40YNL288W MUM3Q08750 479 aa5.74□□□□□ -1.49
CAF40YNL288W SNF8Q12483 233 aa5.74□□□□□ -1.49
CAF40YNL288W IRA2P19158 3079 aa5.74□□□□□ -1.49
CAF40YNL288W CBP2P03874 630 aaPredicted RBP5.73□□□□□ -1.49
CAF40YNL288W ARG3P05150 338 aa5.73□□□□□ -1.49
CAF40YNL288W ALG7P07286 448 aa5.73□□□□□ -1.49
CAF40YNL288W HOM3P10869 527 aa5.73□□□□□ -1.49
CAF40YNL288W YJU2P28320 278 aaPredicted RBP5.73□□□□□ -1.49
CAF40YNL288W RPT5P33297 434 aaKnown RBP5.73□□□□□ -1.49
CAF40YNL288W LST4P34239 828 aa5.73□□□□□ -1.49
CAF40YNL288W HPM1P40481 377 aa5.73□□□□□ -1.49
CAF40YNL288W SPT20P50875 604 aa5.73□□□□□ -1.49
CAF40YNL288W SNP1Q00916 300 aaPredicted RBP5.73□□□□□ -1.49
CAF40YNL288W SVL3Q03088 825 aaKnown RBP5.73□□□□□ -1.49
CAF40YNL288W RAD33Q04231 177 aa5.73□□□□□ -1.49
CAF40YNL288W ATG38Q05789 226 aaKnown RBP5.73□□□□□ -1.49
CAF40YNL288W GMC2Q06201 188 aa5.73□□□□□ -1.49
CAF40YNL288W YOL073CQ08232 322 aa5.73□□□□□ -1.49
CAF40YNL288W YTM1Q12024 460 aaPredicted RBP5.73□□□□□ -1.49
CAF40YNL288W MLH3Q12083 715 aa5.73□□□□□ -1.49
CAF40YNL288W YKL033W-AQ86ZR7 236 aa5.73□□□□□ -1.49
CAF40YNL288W CDC26P14724 124 aa5.72□□□□□ -1.49
CAF40YNL288W SAN1P22470 610 aa5.72□□□□□ -1.49
CAF40YNL288W CHA1P25379 360 aaKnown RBP5.72□□□□□ -1.49
CAF40YNL288W BUD14P27637 709 aa5.72□□□□□ -1.49
CAF40YNL288W PDB1P32473 366 aaKnown RBP5.72□□□□□ -1.49
CAF40YNL288W PPG1P32838 368 aa5.72□□□□□ -1.49
CAF40YNL288W CAB3P36076 571 aa5.72□□□□□ -1.49
CAF40YNL288W SPC42P36094 363 aa5.72□□□□□ -1.49
CAF40YNL288W SCO2P38072 301 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 74.5 ms