RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	PRP46	Q12417	451 aa	Predicted RBP	5.32	□□□□□ -1.56
CSL4	YNL232W	URA2	P07259	2214 aa	Known RBP	5.31	□□□□□ -1.56
CSL4	YNL232W	FLO9	P39712	1322 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	ERG8	P24521	451 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	SPS22	P25380	463 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	URA7	P28274	579 aa	Known RBP	5.31	□□□□□ -1.56
CSL4	YNL232W	CBP4	P37267	147 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.31	□□□□□ -1.56	not detected
CSL4	YNL232W	YIL169C	P40442	995 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	CAB2	P40506	365 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	MDV1	P47025	714 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	EMC2	P47133	292 aa	Known RBP	5.31	□□□□□ -1.56
CSL4	YNL232W	YNL058C	P53947	316 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	KTR5	P53966	522 aa	Predicted RBP	5.31	□□□□□ -1.56
CSL4	YNL232W	LSM3	P57743	89 aa	Known RBP	5.31	□□□□□ -1.56
CSL4	YNL232W	REC102	Q02721	264 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	MUS81	Q04149	632 aa	Predicted RBP	5.31	□□□□□ -1.56
CSL4	YNL232W	YMR114C	Q04471	368 aa	Known RBP	5.31	□□□□□ -1.56
CSL4	YNL232W	REX4	Q08237	289 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	YLR125W	Q12138	136 aa		5.31	□□□□□ -1.56
CSL4	YNL232W	YPL245W	Q12179	454 aa	Known RBP	5.31	□□□□□ -1.56
CSL4	YNL232W	LEU4	P06208	619 aa	Known RBP	5.3	□□□□□ -1.56
CSL4	YNL232W	DAP2	P18962	818 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	SPB1	P25582	841 aa	Predicted RBP	5.3	□□□□□ -1.56
CSL4	YNL232W	KRR1	P25586	316 aa	Predicted RBP	5.3	□□□□□ -1.56
CSL4	YNL232W	CRM1	P30822	1084 aa	Known RBP	5.3	□□□□□ -1.56
CSL4	YNL232W	TUL1	P36096	758 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	YBR071W	P38243	211 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	IFA38	P38286	347 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	YER034W	P40022	185 aa	Known RBP	5.3	□□□□□ -1.56
CSL4	YNL232W	PKP1	P40530	394 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	RPE1	P46969	238 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	TEL2	P53038	688 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	BUD32	P53323	261 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	FAR10	Q06001	478 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	RUP1	Q12242	671 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	YPR064W	Q12492	139 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	Q0297	Q9ZZV8	51 aa		5.3	□□□□□ -1.56
CSL4	YNL232W	YSF3	P0C074	85 aa	Predicted RBP	5.29	□□□□□ -1.56
CSL4	YNL232W	YML002W	P0CF17	737 aa		5.29	□□□□□ -1.56
CSL4	YNL232W	MEF1	P25039	761 aa		5.29	□□□□□ -1.56
CSL4	YNL232W	AAD3	P25612	363 aa		5.29	□□□□□ -1.56
CSL4	YNL232W	ATS1	P31386	333 aa		5.29	□□□□□ -1.56
CSL4	YNL232W	YGP1	P38616	354 aa	Known RBP	5.29	□□□□□ -1.56
CSL4	YNL232W	BZZ1	P38822	633 aa		5.29	□□□□□ -1.56
CSL4	YNL232W	YHR218W	P38899	603 aa		5.29	□□□□□ -1.56
CSL4	YNL232W	PRM10	P42946	383 aa		5.29	□□□□□ -1.56
CSL4	YNL232W	RQC1	Q05468	723 aa	Known RBP	5.29	□□□□□ -1.56
CSL4	YNL232W	PDR8	Q06149	701 aa		5.29	□□□□□ -1.56
CSL4	YNL232W	MLH3	Q12083	715 aa		5.29	□□□□□ -1.56
CSL4	YNL232W	YDL211C	Q12121	372 aa		5.29	□□□□□ -1.56
CSL4	YNL232W	NOP14	Q99207	810 aa	Known RBP	5.29	□□□□□ -1.56
CSL4	YNL232W	CDC31	P06704	161 aa	Known RBP	5.28	□□□□□ -1.56
CSL4	YNL232W	STE12	P13574	688 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	UBC6	P33296	250 aa	Predicted RBP	5.28	□□□□□ -1.56
CSL4	YNL232W	NUP120	P35729	1037 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	HES1	P35843	434 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	RKM3	P38222	552 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	PZF1	P39933	429 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	GAT2	P40209	560 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	CIN1	P40987	1014 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	GCD14	P46959	383 aa	Predicted RBP	5.28	□□□□□ -1.56
CSL4	YNL232W	YJR141W	P47172	347 aa	Predicted RBP	5.28	□□□□□ -1.56
CSL4	YNL232W	SDT1	P53078	280 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	UBX4	P54730	416 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	GIP3	Q03016	1276 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	PFA5	Q03289	374 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	NHP10	Q03435	203 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	TSR2	Q06672	205 aa	Known RBP	5.28	□□□□□ -1.56
CSL4	YNL232W	HBN1	Q96VH4	193 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	Q0144	Q9ZZW2	109 aa		5.28	□□□□□ -1.56
CSL4	YNL232W	ARD1	P07347	238 aa	Predicted RBP	5.27	□□□□□ -1.57
CSL4	YNL232W	YFR010W-A	P0C5N0	62 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	CKI1	P20485	582 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	SEC14	P24280	304 aa	Known RBP	5.27	□□□□□ -1.57
CSL4	YNL232W	PTR2	P32901	601 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	AUR1	P36107	401 aa	Predicted RBP	5.27	□□□□□ -1.57
CSL4	YNL232W	FLO10	P36170	1169 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	BNA4	P38169	460 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	CAJ1	P39101	391 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	SEC9	P40357	651 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	SAE2	P46946	345 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	MNN5	P46982	586 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	RAD17	P48581	401 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	YGR079W	P53249	370 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	SHY1	P53266	389 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	NRG1	Q03125	231 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	VTI1	Q04338	217 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	MIX14	Q04341	121 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	ADE13	Q05911	482 aa	Known RBP	5.27	□□□□□ -1.57
CSL4	YNL232W	RUD3	Q12234	484 aa	Known RBP	5.27	□□□□□ -1.57
CSL4	YNL232W	ZRT2	Q12436	422 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	MHT1	Q12525	324 aa		5.27	□□□□□ -1.57
CSL4	YNL232W	CMD1	P06787	147 aa	Known RBP	5.26	□□□□□ -1.57
CSL4	YNL232W	GCD2	P12754	651 aa	Predicted RBP	5.26	□□□□□ -1.57
CSL4	YNL232W	PDA1	P16387	420 aa	Known RBP	5.26	□□□□□ -1.57
CSL4	YNL232W	CBF1	P17106	351 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	RPB4	P20433	221 aa	Predicted RBP	5.26	□□□□□ -1.57
CSL4	YNL232W	RPI1	P23250	407 aa	Known RBP	5.26	□□□□□ -1.57
CSL4	YNL232W	GPI12	P23797	304 aa		5.26	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms