RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeast

Gene VPS71, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS71	YML041C	SNL1	P40548	159 aa		4.13	□□□□□ -1.75
VPS71	YML041C	SPG5	P42933	373 aa		4.13	□□□□□ -1.75
VPS71	YML041C	LOC1	P43586	204 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS71	YML041C	AVT4	P50944	713 aa		4.13	□□□□□ -1.75
VPS71	YML041C	PMT5	P52867	743 aa		4.13	□□□□□ -1.75
VPS71	YML041C	YNL146W	P53906	100 aa		4.13	□□□□□ -1.75
VPS71	YML041C	RSN1	Q03516	953 aa		4.13	□□□□□ -1.75
VPS71	YML041C	URC2	Q04411	772 aa		4.13	□□□□□ -1.75
VPS71	YML041C	YLR297W	Q05899	129 aa		4.13	□□□□□ -1.75
VPS71	YML041C	YLR413W	Q06689	675 aa		4.13	□□□□□ -1.75
VPS71	YML041C	AYT1	Q12226	474 aa		4.13	□□□□□ -1.75
VPS71	YML041C	VPS63	O13549	108 aa		4.12	□□□□□ -1.75
VPS71	YML041C	ARG4	P04076	463 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS71	YML041C	SUP35	P05453	685 aa	Known RBP	4.12	□□□□□ -1.75
VPS71	YML041C	PRP16	P15938	1071 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS71	YML041C	NDC1	P32500	655 aa		4.12	□□□□□ -1.75
VPS71	YML041C	TOA2	P32774	122 aa		4.12	□□□□□ -1.75
VPS71	YML041C	MST28	P39552	234 aa		4.12	□□□□□ -1.75
VPS71	YML041C	MMF1	P40185	145 aa	Known RBP	4.12	□□□□□ -1.75
VPS71	YML041C	RPR2	P40571	144 aa		4.12	□□□□□ -1.75
VPS71	YML041C	YHC3	P47040	408 aa		4.12	□□□□□ -1.75
VPS71	YML041C	RTT101	P47050	842 aa		4.12	□□□□□ -1.75
VPS71	YML041C	SSN8	P47821	323 aa		4.12	□□□□□ -1.75
VPS71	YML041C	COS10	P52924	374 aa		4.12	□□□□□ -1.75
VPS71	YML041C	YGL114W	P53134	725 aa		4.12	□□□□□ -1.75
VPS71	YML041C	YPR078C	Q06813	372 aa		4.12	□□□□□ -1.75
VPS71	YML041C	RLP24	Q07915	199 aa	Known RBP	4.12	□□□□□ -1.75
VPS71	YML041C	APC2	Q12440	853 aa		4.12	□□□□□ -1.75
VPS71	YML041C	CEX1	Q12453	761 aa		4.12	□□□□□ -1.75
VPS71	YML041C	RPL12A	P0CX53	165 aa	Known RBP	4.11	□□□□□ -1.75
VPS71	YML041C	RPL12B	P0CX54	165 aa		4.11	□□□□□ -1.75
VPS71	YML041C	ARF1	P11076	181 aa	Known RBP	4.11	□□□□□ -1.75
VPS71	YML041C	GAL3	P13045	520 aa		4.11	□□□□□ -1.75
VPS71	YML041C	ATR1	P13090	542 aa		4.11	□□□□□ -1.75
VPS71	YML041C	TRS65	P32893	560 aa		4.11	□□□□□ -1.75
VPS71	YML041C	DOA1	P36037	715 aa		4.11	□□□□□ -1.75
VPS71	YML041C	YBR056W	P38081	501 aa		4.11	□□□□□ -1.75
VPS71	YML041C	MTC4	P38335	694 aa	Known RBP	4.11	□□□□□ -1.75
VPS71	YML041C	YHR177W	P38867	453 aa		4.11	□□□□□ -1.75
VPS71	YML041C	SMC2	P38989	1170 aa	Known RBP	4.11	□□□□□ -1.75
VPS71	YML041C	END3	P39013	349 aa		4.11	□□□□□ -1.75
VPS71	YML041C	ALG8	P40351	577 aa		4.11	□□□□□ -1.75
VPS71	YML041C	SIM1	P40472	476 aa		4.11	□□□□□ -1.75
VPS71	YML041C	STD1	Q02794	444 aa		4.11	□□□□□ -1.75
VPS71	YML041C	ABZ2	Q03266	374 aa		4.11	□□□□□ -1.75
VPS71	YML041C	YDR415C	Q04033	374 aa	Predicted RBP	4.11	□□□□□ -1.75
VPS71	YML041C	ECM7	Q06200	448 aa		4.11	□□□□□ -1.75
VPS71	YML041C	YAP7	Q08182	245 aa		4.11	□□□□□ -1.75
VPS71	YML041C	TIM18	Q08749	192 aa		4.11	□□□□□ -1.75
VPS71	YML041C	MUM3	Q08750	479 aa		4.11	□□□□□ -1.75
VPS71	YML041C	GLE1	Q12315	538 aa		4.11	□□□□□ -1.75
VPS71	YML041C	SAR1	P20606	190 aa	Known RBP	4.1	□□□□□ -1.75
VPS71	YML041C	EFB1	P32471	206 aa	Known RBP	4.1	□□□□□ -1.75
VPS71	YML041C	COX13	P32799	129 aa		4.1	□□□□□ -1.75
VPS71	YML041C	PMU1	P36069	295 aa		4.1	□□□□□ -1.75
VPS71	YML041C	YBR137W	P38276	179 aa		4.1	□□□□□ -1.75
VPS71	YML041C	YHR122W	P38829	231 aa		4.1	□□□□□ -1.75
VPS71	YML041C	PEX18	P38855	283 aa		4.1	□□□□□ -1.75
VPS71	YML041C	AIP1	P46680	615 aa	Known RBP	4.1	□□□□□ -1.75
VPS71	YML041C	STE24	P47154	453 aa		4.1	□□□□□ -1.75
VPS71	YML041C	TOS2	P50078	622 aa		4.1	□□□□□ -1.75
VPS71	YML041C	SHE10	P53075	577 aa		4.1	□□□□□ -1.75
VPS71	YML041C	MRP51	Q02950	344 aa		4.1	□□□□□ -1.75
VPS71	YML041C	RRN5	Q02983	363 aa		4.1	□□□□□ -1.75
VPS71	YML041C	BET5	Q03630	159 aa		4.1	□□□□□ -1.75
VPS71	YML041C	DAP1	Q12091	152 aa		4.1	□□□□□ -1.75
VPS71	YML041C	PKH2	Q12236	1081 aa	Known RBP	4.1	□□□□□ -1.75
VPS71	YML041C	PUT3	P25502	979 aa	Predicted RBP	4.09	□□□□□ -1.75
VPS71	YML041C	MSK1	P32048	576 aa		4.09	□□□□□ -1.75
VPS71	YML041C	PTR2	P32901	601 aa		4.09	□□□□□ -1.75
VPS71	YML041C	SKN1	P33336	771 aa		4.09	□□□□□ -1.75
VPS71	YML041C	BZZ1	P38822	633 aa		4.09	□□□□□ -1.75
VPS71	YML041C	YFR016C	P43597	1233 aa	Known RBP	4.09	□□□□□ -1.75
VPS71	YML041C	LOH1	P47055	219 aa		4.09	□□□□□ -1.75
VPS71	YML041C	PHB2	P50085	310 aa		4.09	□□□□□ -1.75
VPS71	YML041C	POP6	P53218	158 aa		4.09	□□□□□ -1.75
VPS71	YML041C	RET3	P53600	189 aa		4.09	□□□□□ -1.75
VPS71	YML041C	MPS1	P54199	764 aa		4.09	□□□□□ -1.75
VPS71	YML041C	CUR1	Q06469	252 aa		4.09	□□□□□ -1.75
VPS71	YML041C	ARR1	Q06596	294 aa		4.09	□□□□□ -1.75
VPS71	YML041C	RGT2	Q12300	763 aa		4.09	□□□□□ -1.75
VPS71	YML041C	TEF1	P02994	458 aa	Known RBP	4.08	□□□□□ -1.76
VPS71	YML041C	HEM2	P05373	342 aa		4.08	□□□□□ -1.76
VPS71	YML041C	MAS2	P11914	482 aa		4.08	□□□□□ -1.76
VPS71	YML041C	MTF1	P14908	341 aa	Known RBP	4.08	□□□□□ -1.76
VPS71	YML041C	HXT2	P23585	541 aa		4.08	□□□□□ -1.76
VPS71	YML041C	SKT5	P34226	696 aa		4.08	□□□□□ -1.76
VPS71	YML041C	YKL097C	P34245	136 aa		4.08	□□□□□ -1.76
VPS71	YML041C	PTK1	P36002	662 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS71	YML041C	ALP1	P38971	573 aa		4.08	□□□□□ -1.76
VPS71	YML041C	FAA2	P39518	744 aa		4.08	□□□□□ -1.76
VPS71	YML041C	YJL070C	P40361	888 aa		4.08	□□□□□ -1.76
VPS71	YML041C	ATM1	P40416	690 aa		4.08	□□□□□ -1.76
VPS71	YML041C	VOA1	P53262	265 aa		4.08	□□□□□ -1.76
VPS71	YML041C	COS1	P53822	381 aa		4.08	□□□□□ -1.76
VPS71	YML041C	PIR3	Q03180	325 aa		4.08	□□□□□ -1.76
VPS71	YML041C	LDS2	Q08218	356 aa		4.08	□□□□□ -1.76
VPS71	YML041C	YOL075C	Q08234	1294 aa		4.08	□□□□□ -1.76
VPS71	YML041C	RGS2	Q99188	309 aa		4.08	□□□□□ -1.76
VPS71	YML041C	OPI3	P05375	206 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms