RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C MNL1P38888 796 aa8.64□□□□□ -1.03
SEC61YLR378C SPO73P40031 143 aa8.64□□□□□ -1.03
SEC61YLR378C YFL066CP43538 392 aa8.64□□□□□ -1.03
SEC61YLR378C CAK1P43568 368 aaPredicted RBP8.64□□□□□ -1.03
SEC61YLR378C HOC1P47124 396 aa8.64□□□□□ -1.03
SEC61YLR378C UBC9P50623 157 aaPredicted RBP8.64□□□□□ -1.03
SEC61YLR378C SLD3P53135 668 aa8.64□□□□□ -1.03
SEC61YLR378C PRM8P53174 237 aa8.64□□□□□ -1.03
SEC61YLR378C YGR079WP53249 370 aa8.64□□□□□ -1.03
SEC61YLR378C TWF1P53250 332 aa8.64□□□□□ -1.03
SEC61YLR378C CSL4P53859 292 aaPredicted RBP8.64□□□□□ -1.03
SEC61YLR378C RHO4Q00246 291 aa8.64□□□□□ -1.03
SEC61YLR378C SMP3Q04174 516 aa8.64□□□□□ -1.03
SEC61YLR378C YMR310CQ04867 317 aaPredicted RBP8.64□□□□□ -1.03
SEC61YLR378C MMT2Q08970 484 aa8.64□□□□□ -1.03
SEC61YLR378C GLO4Q12320 285 aa8.64□□□□□ -1.03
SEC61YLR378C VPS33P20795 691 aa8.63□□□□□ -1.03
SEC61YLR378C URE2P23202 354 aaKnown RBP8.63□□□□□ -1.03
SEC61YLR378C TAH1P25638 111 aaPredicted RBP8.63□□□□□ -1.03
SEC61YLR378C CDC12P32468 407 aaKnown RBP8.63□□□□□ -1.03
SEC61YLR378C GOS1P38736 223 aa8.63□□□□□ -1.03
SEC61YLR378C IES5P40060 125 aa8.63□□□□□ -1.03
SEC61YLR378C COG3P40094 801 aa8.63□□□□□ -1.03
SEC61YLR378C COG5P53951 403 aa8.63□□□□□ -1.03
SEC61YLR378C RSN1Q03516 953 aa8.63□□□□□ -1.03
SEC61YLR378C ISR1Q06098 443 aaKnown RBP8.63□□□□□ -1.03
SEC61YLR378C FDH1Q08911 376 aa8.63□□□□□ -1.03
SEC61YLR378C YTM1Q12024 460 aaPredicted RBP8.63□□□□□ -1.03
SEC61YLR378C MED11Q99278 115 aa8.63□□□□□ -1.03
SEC61YLR378C PET9P18239 318 aaKnown RBP8.63□□□□□ -1.03
SEC61YLR378C RNQ1P25367 405 aa8.63□□□□□ -1.03
SEC61YLR378C SIC1P38634 284 aa8.63□□□□□ -1.03
SEC61YLR378C EGD2P38879 174 aaKnown RBP8.63□□□□□ -1.03
SEC61YLR378C STE24P47154 453 aa8.63□□□□□ -1.03
SEC61YLR378C RPS12P48589 143 aaKnown RBP8.63□□□□□ -1.03
SEC61YLR378C RBL2P48606 106 aaKnown RBP8.63□□□□□ -1.03
SEC61YLR378C TLG1Q03322 224 aa8.63□□□□□ -1.03
SEC61YLR378C YDR179W-AQ03983 463 aa8.63□□□□□ -1.03
SEC61YLR378C BNA5Q05979 453 aa8.63□□□□□ -1.03
SEC61YLR378C ARO10Q06408 635 aa8.63□□□□□ -1.03
SEC61YLR378C YEH1Q07804 573 aa8.63□□□□□ -1.03
SEC61YLR378C DCI1Q08558 271 aa8.63□□□□□ -1.03
SEC61YLR378C YLR126CQ12288 251 aa8.63□□□□□ -1.03
SEC61YLR378C BMT6Q12291 365 aa8.63□□□□□ -1.03
SEC61YLR378C TRM1P15565 570 aaKnown RBP8.62□□□□□ -1.03
SEC61YLR378C HOP1P20050 605 aa8.62□□□□□ -1.03
SEC61YLR378C RPB5P20434 215 aa8.62□□□□□ -1.03
SEC61YLR378C SLY41P22215 453 aa8.62□□□□□ -1.03
SEC61YLR378C RRP7P25368 297 aaPredicted RBP8.62□□□□□ -1.03
SEC61YLR378C YIM1P28625 365 aa8.62□□□□□ -1.03
SEC61YLR378C IDH1P28834 360 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
SEC61YLR378C ASF2P32448 525 aaPredicted RBP8.62□□□□□ -1.03
SEC61YLR378C AVT6P40074 448 aa8.62□□□□□ -1.03
SEC61YLR378C MET28P40573 187 aa8.62□□□□□ -1.03
SEC61YLR378C FET5P43561 622 aa8.62□□□□□ -1.03
SEC61YLR378C IBA57P47158 497 aa8.62□□□□□ -1.03
SEC61YLR378C YGR168CP53293 376 aa8.62□□□□□ -1.03
SEC61YLR378C ELP4Q02884 456 aaKnown RBP8.62□□□□□ -1.03
SEC61YLR378C PRP3Q03338 469 aaPredicted RBP8.62□□□□□ -1.03
SEC61YLR378C VCX1Q99385 411 aa8.62□□□□□ -1.03
SEC61YLR378C RHB1P25378 209 aa8.61□□□□□ -1.03
SEC61YLR378C VMA6P32366 345 aaKnown RBP8.61□□□□□ -1.03
SEC61YLR378C ZUO1P32527 433 aaKnown RBP8.61□□□□□ -1.03
SEC61YLR378C RPN2P32565 945 aaKnown RBP8.61□□□□□ -1.03
SEC61YLR378C PRP39P39682 629 aaKnown RBP8.61□□□□□ -1.03
SEC61YLR378C HOS2P53096 452 aaPredicted RBP8.61□□□□□ -1.03
SEC61YLR378C SED5Q01590 340 aa8.61□□□□□ -1.03
SEC61YLR378C YOR019WQ99248 730 aa8.61□□□□□ -1.03
SEC61YLR378C MET17P06106 444 aa8.6□□□□□ -1.03
SEC61YLR378C ARE1P25628 610 aa8.6□□□□□ -1.03
SEC61YLR378C CMK1P27466 446 aaKnown RBP8.6□□□□□ -1.03
SEC61YLR378C GSH1P32477 678 aa8.6□□□□□ -1.03
SEC61YLR378C MSN2P33748 704 aa8.6□□□□□ -1.03
SEC61YLR378C TUL1P36096 758 aa8.6□□□□□ -1.03
SEC61YLR378C ECM4P36156 370 aa8.6□□□□□ -1.03
SEC61YLR378C RCY1P39531 840 aa8.6□□□□□ -1.03
SEC61YLR378C ISC1P40015 477 aaKnown RBP8.6□□□□□ -1.03
SEC61YLR378C LTP1P40347 161 aa8.6□□□□□ -1.03
SEC61YLR378C YPS6P40583 537 aa8.6□□□□□ -1.03
SEC61YLR378C SNM1P40993 198 aa8.6□□□□□ -1.03
SEC61YLR378C AAD10P47182 288 aa8.6□□□□□ -1.03
SEC61YLR378C ATF2P53296 535 aa8.6□□□□□ -1.03
SEC61YLR378C TPS1Q00764 495 aaKnown RBP8.6□□□□□ -1.03
SEC61YLR378C GIC2Q06648 383 aa8.6□□□□□ -1.03
SEC61YLR378C RTK1Q12100 620 aaPredicted RBP8.6□□□□□ -1.03
SEC61YLR378C YPL066WQ12194 479 aa8.6□□□□□ -1.03
SEC61YLR378C SEC2P17065 759 aa8.59□□□□□ -1.03
SEC61YLR378C BUD5P25300 642 aaPredicted RBP8.59□□□□□ -1.03
SEC61YLR378C YMC1P32331 307 aa8.59□□□□□ -1.03
SEC61YLR378C YRO2P38079 344 aa8.59□□□□□ -1.03
SEC61YLR378C SOP4P39543 234 aaPredicted RBP8.59□□□□□ -1.03
SEC61YLR378C SOK1P40317 901 aa8.59□□□□□ -1.03
SEC61YLR378C SWP82P43554 623 aa8.59□□□□□ -1.03
SEC61YLR378C BIT61P47041 543 aa8.59□□□□□ -1.03
SEC61YLR378C ROM1P53046 1155 aa8.59□□□□□ -1.03
SEC61YLR378C CDH1P53197 566 aa8.59□□□□□ -1.03
SEC61YLR378C REC102Q02721 264 aa8.59□□□□□ -1.03
SEC61YLR378C ARP10Q04549 284 aa8.59□□□□□ -1.03
SEC61YLR378C MFB1Q04922 465 aa8.59□□□□□ -1.03
SEC61YLR378C RSF1Q05043 376 aa8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms