RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C BRO1P48582 844 aa1.86□□□□□ -2.11
SGD1YLR336C MLC1P53141 149 aa1.86□□□□□ -2.11
SGD1YLR336C RAX1Q08760 435 aa1.86□□□□□ -2.11
SGD1YLR336C NCA2Q12374 616 aa1.86□□□□□ -2.11
SGD1YLR336C FRE6Q12473 712 aa1.86□□□□□ -2.11
SGD1YLR336C HHF1P02309 103 aaKnown RBP1.86□□□□□ -2.11
SGD1YLR336C DAP2P18962 818 aa1.86□□□□□ -2.11
SGD1YLR336C EXG1P23776 448 aaKnown RBP1.86□□□□□ -2.11
SGD1YLR336C PUP2P32379 260 aa1.86□□□□□ -2.11
SGD1YLR336C PHA2P32452 334 aa1.86□□□□□ -2.11
SGD1YLR336C KAR9P32526 644 aa1.86□□□□□ -2.11
SGD1YLR336C SWI3P32591 825 aa1.86□□□□□ -2.11
SGD1YLR336C MNS1P32906 549 aa1.86□□□□□ -2.11
SGD1YLR336C BLI1P35727 113 aa1.86□□□□□ -2.11
SGD1YLR336C YSW1P38280 609 aa1.86□□□□□ -2.11
SGD1YLR336C SBE22P38814 852 aa1.86□□□□□ -2.11
SGD1YLR336C APE4P38821 490 aa1.86□□□□□ -2.11
SGD1YLR336C MNL1P38888 796 aa1.86□□□□□ -2.11
SGD1YLR336C YPL107WQ02873 248 aa1.86□□□□□ -2.11
SGD1YLR336C RSA1Q08932 381 aa1.86□□□□□ -2.11
SGD1YLR336C AHC1Q12433 566 aa1.86□□□□□ -2.11
SGD1YLR336C ADH2P00331 348 aaKnown RBP1.85□□□□□ -2.11
SGD1YLR336C RPL12AP0CX53 165 aaKnown RBP1.85□□□□□ -2.11
SGD1YLR336C RPL12BP0CX54 165 aa1.85□□□□□ -2.11
SGD1YLR336C CLN3P13365 580 aa1.85□□□□□ -2.11
SGD1YLR336C CAP2P13517 287 aa1.85□□□□□ -2.11
SGD1YLR336C SWD3P38123 315 aa1.85□□□□□ -2.11
SGD1YLR336C YHR177WP38867 453 aa1.85□□□□□ -2.11
SGD1YLR336C PAN6P40459 309 aa1.85□□□□□ -2.11
SGD1YLR336C CWC25P53854 179 aaKnown RBP1.85□□□□□ -2.11
SGD1YLR336C NUP116Q02630 1113 aa1.85□□□□□ -2.11
SGD1YLR336C HER2Q03557 464 aa1.85□□□□□ -2.11
SGD1YLR336C SSC1P0CS90 654 aaKnown RBP1.85□□□□□ -2.11
SGD1YLR336C PAD1P33751 242 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
SGD1YLR336C SPP381P38282 291 aaPredicted RBP1.85□□□□□ -2.11
SGD1YLR336C STE24P47154 453 aa1.85□□□□□ -2.11
SGD1YLR336C YDR541CQ03049 344 aa1.85□□□□□ -2.11
SGD1YLR336C URC2Q04411 772 aa1.85□□□□□ -2.11
SGD1YLR336C ATP3P38077 311 aaKnown RBP1.84□□□□□ -2.11
SGD1YLR336C MMF1P40185 145 aaKnown RBP1.84□□□□□ -2.11
SGD1YLR336C YJR085CP47131 105 aaKnown RBP1.84□□□□□ -2.11
SGD1YLR336C GIS2P53849 153 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
SGD1YLR336C HRI1Q05905 244 aaKnown RBP1.84□□□□□ -2.11
SGD1YLR336C ATP1P07251 545 aaKnown RBP1.84□□□□□ -2.12
SGD1YLR336C VPH1P32563 840 aaKnown RBP1.84□□□□□ -2.12
SGD1YLR336C TOA2P32774 122 aa1.84□□□□□ -2.12
SGD1YLR336C CSE2P33308 149 aa1.84□□□□□ -2.12
SGD1YLR336C RRP1P35178 278 aaPredicted RBP1.84□□□□□ -2.12
SGD1YLR336C MRPL4P36517 319 aa1.84□□□□□ -2.12
SGD1YLR336C ADH5P38113 351 aaKnown RBP1.84□□□□□ -2.12
SGD1YLR336C PAC11P40960 533 aa1.84□□□□□ -2.12
SGD1YLR336C YGR210CP42942 411 aa1.84□□□□□ -2.12
SGD1YLR336C RRN9P53437 365 aa1.84□□□□□ -2.12
SGD1YLR336C IPK1Q06667 281 aa1.84□□□□□ -2.12
SGD1YLR336C NOP6Q07623 225 aaKnown RBP1.84□□□□□ -2.12
SGD1YLR336C CUE5Q08412 411 aaKnown RBP1.84□□□□□ -2.12
SGD1YLR336C FDH1Q08911 376 aa1.84□□□□□ -2.12
SGD1YLR336C SKS1Q12505 502 aa1.84□□□□□ -2.12
SGD1YLR336C PET123P17558 318 aa1.83□□□□□ -2.12
SGD1YLR336C ARO2P28777 376 aaKnown RBP1.83□□□□□ -2.12
SGD1YLR336C DPH5P32469 300 aaPredicted RBP1.83□□□□□ -2.12
SGD1YLR336C YOX1P34161 385 aa1.83□□□□□ -2.12
SGD1YLR336C GPX2P38143 162 aa1.83□□□□□ -2.12
SGD1YLR336C YHR131CP38835 850 aa1.83□□□□□ -2.12
SGD1YLR336C EPL1P43572 832 aa1.83□□□□□ -2.12
SGD1YLR336C MRM2P53123 320 aa1.83□□□□□ -2.12
SGD1YLR336C RTT102P53330 157 aa1.83□□□□□ -2.12
SGD1YLR336C SPR6Q01684 191 aa1.83□□□□□ -2.12
SGD1YLR336C ASA1Q06822 443 aa1.83□□□□□ -2.12
SGD1YLR336C RRG7Q08774 242 aaPredicted RBP1.83□□□□□ -2.12
SGD1YLR336C NFI1Q12216 726 aa1.83□□□□□ -2.12
SGD1YLR336C DAL2P25335 343 aa1.83□□□□□ -2.12
SGD1YLR336C POT1P27796 417 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
SGD1YLR336C POP5P28005 173 aa1.83□□□□□ -2.12
SGD1YLR336C YEF1P32622 495 aa1.83□□□□□ -2.12
SGD1YLR336C YHK8P38776 514 aa1.83□□□□□ -2.12
SGD1YLR336C ATM1P40416 690 aa1.83□□□□□ -2.12
SGD1YLR336C ABM1P47146 123 aa1.83□□□□□ -2.12
SGD1YLR336C ASN2P49090 572 aaKnown RBP1.83□□□□□ -2.12
SGD1YLR336C YGR117CP53270 476 aa1.83□□□□□ -2.12
SGD1YLR336C MDG1P53885 366 aa1.83□□□□□ -2.12
SGD1YLR336C PRP3Q03338 469 aaPredicted RBP1.83□□□□□ -2.12
SGD1YLR336C MDM36Q06820 579 aa1.83□□□□□ -2.12
SGD1YLR336C HRT3Q12347 344 aa1.83□□□□□ -2.12
SGD1YLR336C POM152P39685 1337 aa1.83□□□□□ -2.12
SGD1YLR336C ISY1P21374 235 aaPredicted RBP1.82□□□□□ -2.12
SGD1YLR336C SLM5P25345 492 aaKnown RBP1.82□□□□□ -2.12
SGD1YLR336C COX13P32799 129 aa1.82□□□□□ -2.12
SGD1YLR336C LAS1P36146 502 aaPredicted RBP1.82□□□□□ -2.12
SGD1YLR336C WSS1P38838 269 aa1.82□□□□□ -2.12
SGD1YLR336C LCB3P47013 409 aa1.82□□□□□ -2.12
SGD1YLR336C MDE1P47095 244 aa1.82□□□□□ -2.12
SGD1YLR336C YGL242CP53066 181 aa1.82□□□□□ -2.12
SGD1YLR336C TDA1Q03533 586 aa1.82□□□□□ -2.12
SGD1YLR336C YDR061WQ12298 539 aa1.82□□□□□ -2.12
SGD1YLR336C SCH9P11792 824 aaKnown RBP1.82□□□□□ -2.12
SGD1YLR336C FAA1P30624 700 aaKnown RBP1.82□□□□□ -2.12
SGD1YLR336C KAP104P38217 918 aaKnown RBP1.82□□□□□ -2.12
SGD1YLR336C COX14P39103 70 aa1.82□□□□□ -2.12
SGD1YLR336C YIL029CP40538 142 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms