RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	RPT5	P33297	434 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	SSH1	P38353	490 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	SOP4	P39543	234 aa	Predicted RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	RSP5	P39940	809 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	MRX1	P40050	688 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	SOK1	P40317	901 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	VMA13	P41807	478 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	YJR056C	P47115	236 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	GPG1	P53130	126 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	SHY1	P53266	389 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	PBP1	P53297	722 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	HST3	P53687	447 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	YNL181W	P53878	407 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	RIF2	Q06208	395 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	YPR147C	Q06522	304 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	HDA3	Q06623	655 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	PLB3	Q08108	686 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	NBA1	Q08229	501 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	BDS1	Q08347	646 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	SRO7	Q12038	1033 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	LEU9	Q12166	604 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	NTO1	Q12311	748 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	AHA1	Q12449	350 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	RRP12	Q12754	1228 aa	Known RBP	4.7	□□□□□ -1.66
DOA1	YKL213C	YPT6	Q99260	215 aa		4.7	□□□□□ -1.66
DOA1	YKL213C	HXK2	P04807	486 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	FUM1	P08417	488 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	SSA3	P09435	649 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	AAC3	P18238	307 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	SNF5	P18480	905 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	ART10	P18634	518 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	SPR1	P32603	445 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	VAM7	P32912	316 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	VPS21	P36017	210 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	TIF11	P38912	153 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	NPT1	P39683	429 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	AIM2	P39721	246 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	YEL073C	P39974	107 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	CCC1	P47818	322 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	SLM2	P53955	656 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	TIM10	P87108	93 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	SNP1	Q00916	300 aa	Predicted RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	HFD1	Q04458	532 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	GTB1	Q04924	702 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	YLL007C	Q07799	665 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	YPL272C	Q08984	517 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	YPR022C	Q12139	1133 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	PST1	Q12355	444 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	PNS1	Q12412	539 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	CDC21	P06785	304 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	UNG1	P12887	359 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	GUK1	P15454	187 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	CTP1	P38152	299 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
DOA1	YKL213C	UBA4	P38820	440 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	SHU2	P38957	223 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	PTC2	P39966	464 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	DDI1	P40087	428 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	UBP6	P43593	499 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	MRM2	P53123	320 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	RRN9	P53437	365 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	YAT1	P80235	687 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	ACS1	Q01574	713 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	YMR010W	Q03687	405 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	YMD8	Q03697	442 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	RSM24	Q03976	319 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	RSF1	Q05043	376 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	RGC1	Q06108	1083 aa	Known RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	THI73	Q07904	523 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	GPN2	Q08726	347 aa	Predicted RBP	4.69	□□□□□ -1.66
DOA1	YKL213C	HER1	Q12276	1246 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	PSY3	Q12318	242 aa		4.69	□□□□□ -1.66
DOA1	YKL213C	IRA2	P19158	3079 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	SCEI	P03882	235 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	RPL25	P04456	142 aa	Known RBP	4.68	□□□□□ -1.66
DOA1	YKL213C	GCN3	P14741	305 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	PHO81	P17442	1178 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	IMG1	P25626	169 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	PHO91	P27514	894 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	ELF1	P36053	145 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	BZZ1	P38822	633 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	MSS4	P38994	779 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	YIL108W	P40483	696 aa	Known RBP	4.68	□□□□□ -1.66
DOA1	YKL213C	PFA3	P42836	336 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	YJR154W	P47181	346 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	ASK10	P48361	1146 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	NSA1	P53136	463 aa	Predicted RBP	4.68	□□□□□ -1.66
DOA1	YKL213C	GTR2	P53290	341 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	MPS1	P54199	764 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	ECM9	Q02202	377 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	GAS3	Q03655	524 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	YAP6	Q03935	383 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	SWF1	Q04629	336 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	DFG5	Q05031	458 aa		4.68	□□□□□ -1.66
DOA1	YKL213C	GAL4	P04386	881 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	RPP2A	P05319	106 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	KIN28	P06242	306 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	YGL041W-A	P0C5N3	154 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	SCL1	P21243	252 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	YCK2	P23292	546 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms