RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C URB2P47108 1174 aa3.06□□□□□ -1.92
ATG27YJL178C BRO1P48582 844 aa3.06□□□□□ -1.92
ATG27YJL178C AVT4P50944 713 aa3.06□□□□□ -1.92
ATG27YJL178C CWC22P53333 577 aaKnown RBP3.06□□□□□ -1.92
ATG27YJL178C GIR2Q03768 265 aaPredicted RBP3.06□□□□□ -1.92
ATG27YJL178C SMA2Q04658 369 aa3.06□□□□□ -1.92
ATG27YJL178C YMR321CQ04898 105 aa3.06□□□□□ -1.92
ATG27YJL178C RQC1Q05468 723 aaKnown RBP3.06□□□□□ -1.92
ATG27YJL178C YPR078CQ06813 372 aa3.06□□□□□ -1.92
ATG27YJL178C HNT3Q08702 217 aa3.06□□□□□ -1.92
ATG27YJL178C PLP2Q12017 286 aa3.06□□□□□ -1.92
ATG27YJL178C DAS2Q12084 232 aa3.06□□□□□ -1.92
ATG27YJL178C YCL021W-AQ96VH3 125 aa3.06□□□□□ -1.92
ATG27YJL178C ARG4P04076 463 aaPredicted RBP3.05□□□□□ -1.92
ATG27YJL178C CDC42P19073 191 aa3.05□□□□□ -1.92
ATG27YJL178C DAL2P25335 343 aa3.05□□□□□ -1.92
ATG27YJL178C YIM1P28625 365 aa3.05□□□□□ -1.92
ATG27YJL178C ERG3P32353 365 aa3.05□□□□□ -1.92
ATG27YJL178C HXT3P32466 567 aaKnown RBP3.05□□□□□ -1.92
ATG27YJL178C MUD1P32605 298 aaKnown RBP3.05□□□□□ -1.92
ATG27YJL178C YEL043WP32618 956 aa3.05□□□□□ -1.92
ATG27YJL178C BYE1P36106 594 aa3.05□□□□□ -1.92
ATG27YJL178C GDT1P38301 280 aaPredicted RBP3.05□□□□□ -1.92
ATG27YJL178C UTP9P38882 575 aaKnown RBP3.05□□□□□ -1.92
ATG27YJL178C SMC2P38989 1170 aaKnown RBP3.05□□□□□ -1.92
ATG27YJL178C ISC1P40015 477 aaKnown RBP3.05□□□□□ -1.92
ATG27YJL178C GCD10P41814 478 aa3.05□□□□□ -1.92
ATG27YJL178C SPG5P42933 373 aa3.05□□□□□ -1.92
ATG27YJL178C KAP114P53067 1004 aa3.05□□□□□ -1.92
ATG27YJL178C PIR3Q03180 325 aa3.05□□□□□ -1.92
ATG27YJL178C VTI1Q04338 217 aa3.05□□□□□ -1.92
ATG27YJL178C NOP6Q07623 225 aaKnown RBP3.05□□□□□ -1.92
ATG27YJL178C LEU4P06208 619 aaKnown RBP3.04□□□□□ -1.92
ATG27YJL178C TCP1P12612 559 aaKnown RBP3.04□□□□□ -1.92
ATG27YJL178C VMA2P16140 517 aaKnown RBP3.04□□□□□ -1.92
ATG27YJL178C RRP1P35178 278 aaPredicted RBP3.04□□□□□ -1.92
ATG27YJL178C LAS1P36146 502 aaPredicted RBP3.04□□□□□ -1.92
ATG27YJL178C RRT2P38332 387 aa3.04□□□□□ -1.92
ATG27YJL178C LCP5P40079 357 aaPredicted RBP3.04□□□□□ -1.92
ATG27YJL178C YIL089WP40500 205 aa3.04□□□□□ -1.92
ATG27YJL178C MKT1P40850 830 aaKnown RBP3.04□□□□□ -1.92
ATG27YJL178C CPR7P47103 393 aa3.04□□□□□ -1.92
ATG27YJL178C YJR079WP47126 109 aa3.04□□□□□ -1.92
ATG27YJL178C HSH155P49955 971 aaKnown RBP3.04□□□□□ -1.92
ATG27YJL178C ART5P53244 586 aaKnown RBP3.04□□□□□ -1.92
ATG27YJL178C RTT102P53330 157 aa3.04□□□□□ -1.92
ATG27YJL178C YNL146WP53906 100 aa3.04□□□□□ -1.92
ATG27YJL178C RPA49Q01080 415 aaPredicted RBP3.04□□□□□ -1.92
ATG27YJL178C YMR102CQ03177 834 aa3.04□□□□□ -1.92
ATG27YJL178C PPM1Q04081 328 aa3.04□□□□□ -1.92
ATG27YJL178C YDR222WQ04925 415 aa3.04□□□□□ -1.92
ATG27YJL178C CUR1Q06469 252 aa3.04□□□□□ -1.92
ATG27YJL178C RLP24Q07915 199 aaKnown RBP3.04□□□□□ -1.92
ATG27YJL178C IES4Q08561 116 aa3.04□□□□□ -1.92
ATG27YJL178C ECM29P38737 1868 aa3.04□□□□□ -1.92
ATG27YJL178C LAA1P39526 2014 aa3.03□□□□□ -1.92
ATG27YJL178C MOT1P32333 1867 aa3.03□□□□□ -1.92
ATG27YJL178C YLR462WO13556 202 aa3.03□□□□□ -1.92
ATG27YJL178C RHO2P06781 192 aa3.03□□□□□ -1.92
ATG27YJL178C RAD10P06838 210 aa3.03□□□□□ -1.92
ATG27YJL178C CDC33P07260 213 aaKnown RBP3.03□□□□□ -1.92
ATG27YJL178C CHS1P08004 1131 aa3.03□□□□□ -1.92
ATG27YJL178C RPL4AP10664 362 aaKnown RBP3.03□□□□□ -1.92
ATG27YJL178C RRT12P25381 491 aa3.03□□□□□ -1.92
ATG27YJL178C YCR100CP25606 316 aa3.03□□□□□ -1.92
ATG27YJL178C CRM1P30822 1084 aaKnown RBP3.03□□□□□ -1.92
ATG27YJL178C NDI1P32340 513 aa3.03□□□□□ -1.92
ATG27YJL178C GLC7P32598 312 aaKnown RBP3.03□□□□□ -1.92
ATG27YJL178C COT1P32798 439 aa3.03□□□□□ -1.92
ATG27YJL178C GYP6P32806 458 aa3.03□□□□□ -1.92
ATG27YJL178C SWH1P35845 1188 aa3.03□□□□□ -1.92
ATG27YJL178C RSM22P36056 628 aa3.03□□□□□ -1.92
ATG27YJL178C TVP38P36164 337 aa3.03□□□□□ -1.92
ATG27YJL178C MRX3P38172 270 aa3.03□□□□□ -1.92
ATG27YJL178C RCK2P38623 610 aa3.03□□□□□ -1.92
ATG27YJL178C HIS2P38635 335 aa3.03□□□□□ -1.92
ATG27YJL178C YHL049CP38722 271 aa3.03□□□□□ -1.92
ATG27YJL178C YEL075CP39972 122 aa3.03□□□□□ -1.92
ATG27YJL178C YER189WP40104 122 aa3.03□□□□□ -1.92
ATG27YJL178C YFL064CP43540 174 aa3.03□□□□□ -1.92
ATG27YJL178C TRS85P46944 698 aa3.03□□□□□ -1.92
ATG27YJL178C ASG7P46993 209 aa3.03□□□□□ -1.92
ATG27YJL178C RPL4BP49626 362 aaKnown RBP3.03□□□□□ -1.92
ATG27YJL178C OGG1P53397 376 aaPredicted RBP3.03□□□□□ -1.92
ATG27YJL178C CAF40P53829 373 aa3.03□□□□□ -1.92
ATG27YJL178C MRS2Q01926 470 aa3.03□□□□□ -1.92
ATG27YJL178C HEL2Q05580 639 aaKnown RBP3.03□□□□□ -1.92
ATG27YJL178C DON1Q05610 365 aa3.03□□□□□ -1.92
ATG27YJL178C YBL111CQ3E7Y5 667 aa3.03□□□□□ -1.92
ATG27YJL178C CDC8P00572 216 aa3.02□□□□□ -1.93
ATG27YJL178C COX4P04037 155 aa3.02□□□□□ -1.93
ATG27YJL178C REV1P12689 985 aa3.02□□□□□ -1.93
ATG27YJL178C CPR1P14832 162 aaKnown RBP3.02□□□□□ -1.93
ATG27YJL178C CBF1P17106 351 aa3.02□□□□□ -1.93
ATG27YJL178C CSG2P35206 410 aa3.02□□□□□ -1.93
ATG27YJL178C BLI1P35727 113 aa3.02□□□□□ -1.93
ATG27YJL178C END3P39013 349 aa3.02□□□□□ -1.93
ATG27YJL178C CCT2P39076 527 aaKnown RBP3.02□□□□□ -1.93
ATG27YJL178C VAB2P40003 282 aa3.02□□□□□ -1.93
ATG27YJL178C RRT5P43607 289 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms