RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C HFA1P32874 2273 aa3.81□□□□□ -1.8
SDS3YIL084C RPL15AP05748 204 aaKnown RBP3.81□□□□□ -1.8
SDS3YIL084C MSF1P08425 469 aa3.81□□□□□ -1.8
SDS3YIL084C ASP3-2P0CX77 362 aa3.81□□□□□ -1.8
SDS3YIL084C ASP3-3P0CX78 362 aa3.81□□□□□ -1.8
SDS3YIL084C ASP3-4P0CX79 362 aa3.81□□□□□ -1.8
SDS3YIL084C ASP3-1P0CZ17 362 aa3.81□□□□□ -1.8
SDS3YIL084C SPC110P32380 944 aa3.81□□□□□ -1.8
SDS3YIL084C HXT3P32466 567 aaKnown RBP3.81□□□□□ -1.8
SDS3YIL084C RML2P32611 393 aa3.81□□□□□ -1.8
SDS3YIL084C SRX1P36077 127 aa3.81□□□□□ -1.8
SDS3YIL084C TUL1P36096 758 aa3.81□□□□□ -1.8
SDS3YIL084C TIF5P38431 405 aaKnown RBP3.81□□□□□ -1.8
SDS3YIL084C SHO1P40073 367 aa3.81□□□□□ -1.8
SDS3YIL084C FAU1P40099 211 aa3.81□□□□□ -1.8
SDS3YIL084C BTT1P40314 149 aaPredicted RBP3.81□□□□□ -1.8
SDS3YIL084C SSU1P41930 458 aa3.81□□□□□ -1.8
SDS3YIL084C ERP1Q05359 219 aaKnown RBP3.81□□□□□ -1.8
SDS3YIL084C TAF10Q12030 206 aa3.81□□□□□ -1.8
SDS3YIL084C PPT2Q12036 173 aa3.81□□□□□ -1.8
SDS3YIL084C SET6Q12529 373 aa3.81□□□□□ -1.8
SDS3YIL084C CSF1Q12150 2958 aa3.81□□□□□ -1.8
SDS3YIL084C UTP20P35194 2493 aaKnown RBP3.8□□□□□ -1.8
SDS3YIL084C HSP82P02829 709 aaKnown RBP3.8□□□□□ -1.8
SDS3YIL084C GPH1P06738 902 aaKnown RBP3.8□□□□□ -1.8
SDS3YIL084C RPL20AP0CX23 172 aaKnown RBP3.8□□□□□ -1.8
SDS3YIL084C RPL20BP0CX24 172 aaPredicted RBP3.8□□□□□ -1.8
SDS3YIL084C BUB3P26449 341 aa3.8□□□□□ -1.8
SDS3YIL084C YSC83P32792 385 aa3.8□□□□□ -1.8
SDS3YIL084C MPE1P35728 441 aaKnown RBP3.8□□□□□ -1.8
SDS3YIL084C MTC4P38335 694 aaKnown RBP3.8□□□□□ -1.8
SDS3YIL084C YHR054CP38780 354 aa3.8□□□□□ -1.8
SDS3YIL084C DHH1P39517 506 aaKnown RBP3.8□□□□□ -1.8
SDS3YIL084C RPH1P39956 796 aa3.8□□□□□ -1.8
SDS3YIL084C ALG8P40351 577 aa3.8□□□□□ -1.8
SDS3YIL084C GWT1P47026 490 aa3.8□□□□□ -1.8
SDS3YIL084C HSH155P49955 971 aaKnown RBP3.8□□□□□ -1.8
SDS3YIL084C RPA49Q01080 415 aaPredicted RBP3.8□□□□□ -1.8
SDS3YIL084C YOR387CQ08910 206 aa3.8□□□□□ -1.8
SDS3YIL084C SPE3Q12074 293 aaKnown RBP3.8□□□□□ -1.8
SDS3YIL084C NBL1Q3E7Y6 73 aa3.8□□□□□ -1.8
SDS3YIL084C YBR056W-AI2HB52 66 aa3.79□□□□□ -1.8
SDS3YIL084C ATR1P13090 542 aa3.79□□□□□ -1.8
SDS3YIL084C ATP10P18496 279 aa3.79□□□□□ -1.8
SDS3YIL084C PRS1P32895 427 aaKnown RBP3.79□□□□□ -1.8
SDS3YIL084C TKL2P33315 681 aa3.79□□□□□ -1.8
SDS3YIL084C NTC20P38302 140 aaPredicted RBP3.79□□□□□ -1.8
SDS3YIL084C BAT1P38891 393 aaKnown RBP3.79□□□□□ -1.8
SDS3YIL084C AVT2P39981 480 aa3.79□□□□□ -1.8
SDS3YIL084C LSM5P40089 93 aaKnown RBP3.79□□□□□ -1.8
SDS3YIL084C VEL1P53058 206 aa3.79□□□□□ -1.8
SDS3YIL084C RRP45Q05636 305 aaKnown RBP3.79□□□□□ -1.8
SDS3YIL084C FUS2Q05670 677 aa3.79□□□□□ -1.8
SDS3YIL084C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SDS3YIL084C GPM2Q12008 311 aa3.79□□□□□ -1.8
SDS3YIL084C RKM5Q12367 367 aa3.79□□□□□ -1.8
SDS3YIL084C CEX1Q12453 761 aa3.79□□□□□ -1.8
SDS3YIL084C SRV2P17555 526 aaKnown RBP3.78□□□□□ -1.8
SDS3YIL084C YIM1P28625 365 aa3.78□□□□□ -1.8
SDS3YIL084C FRE2P36033 711 aa3.78□□□□□ -1.8
SDS3YIL084C PMU1P36069 295 aa3.78□□□□□ -1.8
SDS3YIL084C ARA1P38115 344 aa3.78□□□□□ -1.8
SDS3YIL084C THI2P38141 450 aa3.78□□□□□ -1.8
SDS3YIL084C VHC1P38329 1120 aa3.78□□□□□ -1.8
SDS3YIL084C TIF34P40217 347 aaKnown RBP3.78□□□□□ -1.8
SDS3YIL084C RPR2P40571 144 aa3.78□□□□□ -1.8
SDS3YIL084C YJL213WP40896 331 aa3.78□□□□□ -1.8
SDS3YIL084C VMA13P41807 478 aaKnown RBP3.78□□□□□ -1.8
SDS3YIL084C TFG2P41896 400 aaPredicted RBP3.78□□□□□ -1.8
SDS3YIL084C YGR266WP53326 701 aa3.78□□□□□ -1.8
SDS3YIL084C OGG1P53397 376 aaPredicted RBP3.78□□□□□ -1.8
SDS3YIL084C DSL1P53847 754 aa3.78□□□□□ -1.8
SDS3YIL084C AYT1Q12226 474 aa3.78□□□□□ -1.8
SDS3YIL084C YAR066WP0CX18 203 aa3.77□□□□□ -1.81
SDS3YIL084C YHR214WP0CX19 203 aa3.77□□□□□ -1.81
SDS3YIL084C MATALPHA2P0CY08 210 aa3.77□□□□□ -1.81
SDS3YIL084C HMLALPHA2P0CY09 210 aa3.77□□□□□ -1.81
SDS3YIL084C REV1P12689 985 aa3.77□□□□□ -1.81
SDS3YIL084C PDX1P16451 410 aa3.77□□□□□ -1.81
SDS3YIL084C YCR051WP25631 222 aa3.77□□□□□ -1.81
SDS3YIL084C CRM1P30822 1084 aaKnown RBP3.77□□□□□ -1.81
SDS3YIL084C NIP100P33420 868 aa3.77□□□□□ -1.81
SDS3YIL084C OPY1P38271 328 aa3.77□□□□□ -1.81
SDS3YIL084C SHE3P38272 425 aaKnown RBP3.77□□□□□ -1.81
SDS3YIL084C YBP1P38315 674 aa3.77□□□□□ -1.81
SDS3YIL084C WSC4P38739 605 aa3.77□□□□□ -1.81
SDS3YIL084C HAT2P39984 401 aa3.77□□□□□ -1.81
SDS3YIL084C ISC1P40015 477 aaKnown RBP3.77□□□□□ -1.81
SDS3YIL084C YDL186WP48568 277 aa3.77□□□□□ -1.81
SDS3YIL084C SHE10P53075 577 aa3.77□□□□□ -1.81
SDS3YIL084C GIS2P53849 153 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
SDS3YIL084C NOP13P53883 403 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
SDS3YIL084C AQR1P53943 586 aa3.77□□□□□ -1.81
SDS3YIL084C SIL1Q08199 421 aa3.77□□□□□ -1.81
SDS3YIL084C HSP42Q12329 375 aa3.77□□□□□ -1.81
SDS3YIL084C YBR298C-AQ8TGK4 73 aa3.77□□□□□ -1.81
SDS3YIL084C MEC1P38111 2368 aa3.76□□□□□ -1.81
SDS3YIL084C GDH1P07262 454 aaKnown RBP3.76□□□□□ -1.81
SDS3YIL084C PHO2P07269 559 aa3.76□□□□□ -1.81
SDS3YIL084C CHS1P08004 1131 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms