RNA–Protein interactions for RNA: YIL019W

FAF1, Transcript of Protein required for pre-rRNA processing, yeast

Gene FAF1, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAF1	YIL019W	ASK1	P35734	292 aa		6.29	□□□□□ -1.4
FAF1	YIL019W	MNN9	P39107	395 aa	Known RBP	6.29	□□□□□ -1.4
FAF1	YIL019W	SIM1	P40472	476 aa		6.29	□□□□□ -1.4
FAF1	YIL019W	RET3	P53600	189 aa		6.29	□□□□□ -1.4
FAF1	YIL019W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	6.29	□□□□□ -1.4	not detected
FAF1	YIL019W	CUR1	Q06469	252 aa		6.29	□□□□□ -1.4
FAF1	YIL019W	ASA1	Q06822	443 aa		6.29	□□□□□ -1.4
FAF1	YIL019W	YAP7	Q08182	245 aa		6.29	□□□□□ -1.4
FAF1	YIL019W	GEP3	Q08622	556 aa		6.29	□□□□□ -1.4
FAF1	YIL019W	RNA1	P11745	407 aa	Known RBP	6.28	□□□□□ -1.4
FAF1	YIL019W	DBR1	P24309	405 aa	Known RBP	6.28	□□□□□ -1.4
FAF1	YIL019W	DOA1	P36037	715 aa		6.28	□□□□□ -1.4
FAF1	YIL019W	ARC40	P38328	384 aa	Known RBP	6.28	□□□□□ -1.4
FAF1	YIL019W	YHR122W	P38829	231 aa		6.28	□□□□□ -1.4
FAF1	YIL019W	ALP1	P38971	573 aa		6.28	□□□□□ -1.4
FAF1	YIL019W	MST28	P39552	234 aa		6.28	□□□□□ -1.4
FAF1	YIL019W	ATM1	P40416	690 aa		6.28	□□□□□ -1.4
FAF1	YIL019W	AIM20	P40451	204 aa		6.28	□□□□□ -1.4
FAF1	YIL019W	LAM5	P43560	674 aa		6.28	□□□□□ -1.4
FAF1	YIL019W	SSN8	P47821	323 aa		6.28	□□□□□ -1.4
FAF1	YIL019W	LDS2	Q08218	356 aa		6.28	□□□□□ -1.4
FAF1	YIL019W	AIM45	Q12480	344 aa	Known RBP	6.28	□□□□□ -1.4
FAF1	YIL019W	PUT4	P15380	627 aa		6.27	□□□□□ -1.41
FAF1	YIL019W	SAM2	P19358	384 aa	Known RBP	6.27	□□□□□ -1.41
FAF1	YIL019W	NDC1	P32500	655 aa		6.27	□□□□□ -1.41
FAF1	YIL019W	COX13	P32799	129 aa		6.27	□□□□□ -1.41
FAF1	YIL019W	EBP2	P36049	427 aa	Known RBP	6.27	□□□□□ -1.41
FAF1	YIL019W	ALG8	P40351	577 aa		6.27	□□□□□ -1.41
FAF1	YIL019W	YGL114W	P53134	725 aa		6.27	□□□□□ -1.41
FAF1	YIL019W	YLR281C	Q05863	155 aa		6.27	□□□□□ -1.41
FAF1	YIL019W	HEM2	P05373	342 aa		6.26	□□□□□ -1.41
FAF1	YIL019W	ATO2	P32907	282 aa		6.26	□□□□□ -1.41
FAF1	YIL019W	LOS1	P33418	1100 aa	Predicted RBP	6.26	□□□□□ -1.41
FAF1	YIL019W	ATP3	P38077	311 aa	Known RBP	6.26	□□□□□ -1.41
FAF1	YIL019W	SCW4	P53334	386 aa	Known RBP	6.26	□□□□□ -1.41
FAF1	YIL019W	YNL146W	P53906	100 aa		6.26	□□□□□ -1.41
FAF1	YIL019W	PIR3	Q03180	325 aa		6.26	□□□□□ -1.41
FAF1	YIL019W	FMP42	Q04991	504 aa		6.26	□□□□□ -1.41
FAF1	YIL019W	YLR297W	Q05899	129 aa		6.26	□□□□□ -1.41
FAF1	YIL019W	ARR1	Q06596	294 aa		6.26	□□□□□ -1.41
FAF1	YIL019W	FSH3	Q99369	266 aa		6.26	□□□□□ -1.41
FAF1	YIL019W	TPK3	P05986	398 aa		6.25	□□□□□ -1.41
FAF1	YIL019W	ATP1	P07251	545 aa	Known RBP	6.25	□□□□□ -1.41
FAF1	YIL019W	GAL7	P08431	366 aa		6.25	□□□□□ -1.41
FAF1	YIL019W	MRS3	P10566	314 aa		6.25	□□□□□ -1.41
FAF1	YIL019W	MTF1	P14908	341 aa	Known RBP	6.25	□□□□□ -1.41
FAF1	YIL019W	TOA2	P32774	122 aa		6.25	□□□□□ -1.41
FAF1	YIL019W	LCP5	P40079	357 aa	Predicted RBP	6.25	□□□□□ -1.41
FAF1	YIL019W	LOC1	P43586	204 aa	Predicted RBP	6.25	□□□□□ -1.41
FAF1	YIL019W	TOS3	P43637	560 aa		6.25	□□□□□ -1.41
FAF1	YIL019W	EGD1	Q02642	157 aa	Known RBP	6.25	□□□□□ -1.41
FAF1	YIL019W	YPL068C	Q02749	293 aa		6.25	□□□□□ -1.41
FAF1	YIL019W	AIM33	Q04516	312 aa		6.25	□□□□□ -1.41
FAF1	YIL019W	HCR1	Q05775	265 aa	Known RBP	6.25	□□□□□ -1.41
FAF1	YIL019W	YPL199C	Q08954	240 aa		6.25	□□□□□ -1.41
FAF1	YIL019W	TPT1	Q12272	230 aa	Known RBP	6.25	□□□□□ -1.41
FAF1	YIL019W	NCA2	Q12374	616 aa		6.25	□□□□□ -1.41
FAF1	YIL019W	YIL002W-A	Q3E7Z5	69 aa		6.25	□□□□□ -1.41
FAF1	YIL019W	KKQ8	P36004	724 aa		6.24	□□□□□ -1.41
FAF1	YIL019W	TIF5	P38431	405 aa	Known RBP	6.24	□□□□□ -1.41
FAF1	YIL019W	YJL070C	P40361	888 aa		6.24	□□□□□ -1.41
FAF1	YIL019W	LYS12	P40495	371 aa	Known RBP	6.24	□□□□□ -1.41
FAF1	YIL019W	AZR1	P50080	613 aa		6.24	□□□□□ -1.41
FAF1	YIL019W	GLE1	Q12315	538 aa		6.24	□□□□□ -1.41
FAF1	YIL019W	SPO24	Q3E752	67 aa		6.24	□□□□□ -1.41
FAF1	YIL019W	RPS16A	P0CX51	143 aa	Known RBP	6.23	□□□□□ -1.41
FAF1	YIL019W	RPS16B	P0CX52	143 aa	Known RBP	6.23	□□□□□ -1.41
FAF1	YIL019W	YCR043C	P25361	127 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	SKT5	P34226	696 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	PMU1	P36069	295 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	MTC4	P38335	694 aa	Known RBP	6.23	□□□□□ -1.41
FAF1	YIL019W	VPS45	P38932	577 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	END3	P39013	349 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	MET30	P39014	640 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	PRP39	P39682	629 aa	Known RBP	6.23	□□□□□ -1.41
FAF1	YIL019W	YND1	P40009	630 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	YIL169C	P40442	995 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	YHC3	P47040	408 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	RTT101	P47050	842 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	YGR117C	P53270	476 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	RRN9	P53437	365 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	CEX1	Q12453	761 aa		6.23	□□□□□ -1.41
FAF1	YIL019W	SLY1	P22213	666 aa		6.22	□□□□□ -1.41
FAF1	YIL019W	SWC5	P38326	303 aa		6.22	□□□□□ -1.41
FAF1	YIL019W	TES1	P41903	349 aa	Known RBP	6.22	□□□□□ -1.41
FAF1	YIL019W	AIP1	P46680	615 aa	Known RBP	6.22	□□□□□ -1.41
FAF1	YIL019W	SFH5	P47008	294 aa		6.22	□□□□□ -1.41
FAF1	YIL019W	RPN14	P53196	417 aa		6.22	□□□□□ -1.41
FAF1	YIL019W	YLR413W	Q06689	675 aa		6.22	□□□□□ -1.41
FAF1	YIL019W	SNA4	Q07549	140 aa		6.22	□□□□□ -1.41
FAF1	YIL019W	MAS2	P11914	482 aa		6.21	□□□□□ -1.42
FAF1	YIL019W	ATR1	P13090	542 aa		6.21	□□□□□ -1.42
FAF1	YIL019W	CLN3	P13365	580 aa		6.21	□□□□□ -1.42
FAF1	YIL019W	PUT3	P25502	979 aa	Predicted RBP	6.21	□□□□□ -1.42
FAF1	YIL019W	ATS1	P31386	333 aa		6.21	□□□□□ -1.42
FAF1	YIL019W	EFB1	P32471	206 aa	Known RBP	6.21	□□□□□ -1.42
FAF1	YIL019W	FAA2	P39518	744 aa		6.21	□□□□□ -1.42
FAF1	YIL019W	YMR181C	Q03231	154 aa		6.21	□□□□□ -1.42
FAF1	YIL019W	CAB5	Q03941	241 aa		6.21	□□□□□ -1.42
FAF1	YIL019W	YMR111C	Q04461	462 aa	Predicted RBP	6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms