RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W NCL1P38205 684 aaKnown RBP5.64□□□□□ -1.51
SKN1YGR143W CYC2P38909 366 aa5.64□□□□□ -1.51
SKN1YGR143W KHA1P40309 873 aa5.64□□□□□ -1.51
SKN1YGR143W CHS6P40955 746 aa5.64□□□□□ -1.51
SKN1YGR143W PMT4P46971 762 aa5.64□□□□□ -1.51
SKN1YGR143W MNN5P46982 586 aa5.64□□□□□ -1.51
SKN1YGR143W YGR250CP53316 781 aaKnown RBP5.64□□□□□ -1.51
SKN1YGR143W NOP13P53883 403 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
SKN1YGR143W DIA1P54005 336 aa5.64□□□□□ -1.51
SKN1YGR143W HXT15P54854 567 aa5.64□□□□□ -1.51
SKN1YGR143W EFR3Q03653 782 aaKnown RBP5.64□□□□□ -1.51
SKN1YGR143W AIM36Q03798 255 aa5.64□□□□□ -1.51
SKN1YGR143W MSC3Q05812 728 aa5.64□□□□□ -1.51
SKN1YGR143W ECI1Q05871 280 aa5.64□□□□□ -1.51
SKN1YGR143W ADY4Q05955 493 aa5.64□□□□□ -1.51
SKN1YGR143W YPR202WQ08993 238 aa5.64□□□□□ -1.51
SKN1YGR143W YRR1Q12172 810 aa5.64□□□□□ -1.51
SKN1YGR143W YOR342CQ12182 319 aa5.64□□□□□ -1.51
SKN1YGR143W YDR262WQ12331 272 aa5.64□□□□□ -1.51
SKN1YGR143W DCP1Q12517 231 aaPredicted RBP5.64□□□□□ -1.51
SKN1YGR143W HSH49Q99181 213 aaPredicted RBP5.64□□□□□ -1.51
SKN1YGR143W TPK1P06244 397 aa5.63□□□□□ -1.51
SKN1YGR143W TRP4P07285 380 aaPredicted RBP5.63□□□□□ -1.51
SKN1YGR143W SRD1P09007 221 aa5.63□□□□□ -1.51
SKN1YGR143W BAR1P12630 587 aa5.63□□□□□ -1.51
SKN1YGR143W RPL3P14126 387 aaKnown RBP5.63□□□□□ -1.51
SKN1YGR143W AFT1P22149 690 aa5.63□□□□□ -1.51
SKN1YGR143W YCK1P23291 538 aa5.63□□□□□ -1.51
SKN1YGR143W PRP21P32524 280 aaPredicted RBP5.63□□□□□ -1.51
SKN1YGR143W TOD6P34219 525 aa5.63□□□□□ -1.51
SKN1YGR143W CSG2P35206 410 aa5.63□□□□□ -1.51
SKN1YGR143W SET5P38890 526 aaKnown RBP5.63□□□□□ -1.51
SKN1YGR143W FIR1P40020 876 aa5.63□□□□□ -1.51
SKN1YGR143W TGL3P40308 642 aa5.63□□□□□ -1.51
SKN1YGR143W CPR7P47103 393 aa5.63□□□□□ -1.51
SKN1YGR143W YAE1P47118 141 aaPredicted RBP5.63□□□□□ -1.51
SKN1YGR143W UBC12P52491 188 aa5.63□□□□□ -1.51
SKN1YGR143W PKP2P53170 491 aa5.63□□□□□ -1.51
SKN1YGR143W GET1P53192 235 aa5.63□□□□□ -1.51
SKN1YGR143W GPI1P53306 609 aa5.63□□□□□ -1.51
SKN1YGR143W YNL181WP53878 407 aa5.63□□□□□ -1.51
SKN1YGR143W SAE3P89114 91 aa5.63□□□□□ -1.51
SKN1YGR143W SIZ1Q04195 904 aa5.63□□□□□ -1.51
SKN1YGR143W ERG27Q12452 347 aaKnown RBP5.63□□□□□ -1.51
SKN1YGR143W YPR1Q12458 312 aa5.63□□□□□ -1.51
SKN1YGR143W FSH3Q99369 266 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-DR4O74302 440 aa5.63□□□□□ -1.51
SKN1YGR143W PPR1P07272 904 aaPredicted RBP5.63□□□□□ -1.51
SKN1YGR143W SWI5P08153 709 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-AP0CX57 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-PR1P0CX58 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-ORP0CX59 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-PR2P0CX60 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-DR5P0CX65 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-ER2P0CX66 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-GR3P0CX67 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-LR1P0CX68 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-MR2P0CX69 440 aa5.63□□□□□ -1.51
SKN1YGR143W PHO81P17442 1178 aa5.63□□□□□ -1.51
SKN1YGR143W ESS1P22696 170 aa5.63□□□□□ -1.51
SKN1YGR143W CDC50P25656 391 aa5.63□□□□□ -1.51
SKN1YGR143W CDC20P26309 610 aa5.63□□□□□ -1.51
SKN1YGR143W COQ2P32378 372 aa5.63□□□□□ -1.51
SKN1YGR143W PIN4P34217 668 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
SKN1YGR143W FIG1P38224 298 aa5.63□□□□□ -1.51
SKN1YGR143W TCM62P38228 572 aaKnown RBP5.63□□□□□ -1.51
SKN1YGR143W ECM8P38246 354 aa5.63□□□□□ -1.51
SKN1YGR143W YBR220CP38318 560 aa5.63□□□□□ -1.51
SKN1YGR143W ARC1P46672 376 aaKnown RBP5.63□□□□□ -1.51
SKN1YGR143W PHO86P46956 311 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-JR2P47099 440 aa5.63□□□□□ -1.51
SKN1YGR143W AAD10P47182 288 aa5.63□□□□□ -1.51
SKN1YGR143W CLA4P48562 842 aa5.63□□□□□ -1.51
SKN1YGR143W YGR017WP53210 297 aa5.63□□□□□ -1.51
SKN1YGR143W SPC98P53540 846 aa5.63□□□□□ -1.51
SKN1YGR143W HXT11P54862 567 aa5.63□□□□□ -1.51
SKN1YGR143W TRS31Q03337 283 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-DR1Q03856 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-ML1Q04706 440 aaKnown RBP5.63□□□□□ -1.51
SKN1YGR143W MFB1Q04922 465 aa5.63□□□□□ -1.51
SKN1YGR143W MDM32Q12171 622 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-BRQ12217 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-NL2Q12470 440 aa5.63□□□□□ -1.51
SKN1YGR143W TY1A-GR2Q12485 440 aa5.63□□□□□ -1.51
SKN1YGR143W YBR085C-AO43137 85 aa5.62□□□□□ -1.51
SKN1YGR143W ADH2P00331 348 aaKnown RBP5.62□□□□□ -1.51
SKN1YGR143W SST2P11972 698 aaKnown RBP5.62□□□□□ -1.51
SKN1YGR143W PRE1P22141 198 aaKnown RBP5.62□□□□□ -1.51
SKN1YGR143W MRPL9P31334 269 aa5.62□□□□□ -1.51
SKN1YGR143W ALY1P36117 915 aa5.62□□□□□ -1.51
SKN1YGR143W YCR087C-AP37263 153 aa5.62□□□□□ -1.51
SKN1YGR143W EXO5P38289 585 aa5.62□□□□□ -1.51
SKN1YGR143W AME1P38313 324 aa5.62□□□□□ -1.51
SKN1YGR143W RRP4P38792 359 aaKnown RBP5.62□□□□□ -1.51
SKN1YGR143W GAA1P39012 614 aa5.62□□□□□ -1.51
SKN1YGR143W VFA1P40080 203 aa5.62□□□□□ -1.51
SKN1YGR143W YKE4P40544 346 aa5.62□□□□□ -1.51
SKN1YGR143W OPT1P40897 799 aa5.62□□□□□ -1.51
SKN1YGR143W AGP3P43548 558 aa5.62□□□□□ -1.51
SKN1YGR143W RPA34P47006 233 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms