RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W RHO2P06781 192 aa4.14□□□□□ -1.75
PRE9YGR135W RPC40P07703 335 aaKnown RBP4.14□□□□□ -1.75
PRE9YGR135W FBA1P14540 359 aaKnown RBP4.14□□□□□ -1.75
PRE9YGR135W CBS2P14905 389 aa4.14□□□□□ -1.75
PRE9YGR135W UGA1P17649 471 aa4.14□□□□□ -1.75
PRE9YGR135W APN1P22936 367 aa4.14□□□□□ -1.75
PRE9YGR135W VPS3P23643 1011 aa4.14□□□□□ -1.75
PRE9YGR135W CSM1P25651 190 aa4.14□□□□□ -1.75
PRE9YGR135W SAC1P32368 623 aaKnown RBP4.14□□□□□ -1.75
PRE9YGR135W NUP2P32499 720 aa4.14□□□□□ -1.75
PRE9YGR135W MRP4P32902 394 aa4.14□□□□□ -1.75
PRE9YGR135W OAR1P35731 278 aa4.14□□□□□ -1.75
PRE9YGR135W UIP5P36137 443 aa4.14□□□□□ -1.75
PRE9YGR135W SKG1P36169 355 aa4.14□□□□□ -1.75
PRE9YGR135W APL3P38065 1025 aa4.14□□□□□ -1.75
PRE9YGR135W SWC5P38326 303 aa4.14□□□□□ -1.75
PRE9YGR135W GND1P38720 489 aaKnown RBP4.14□□□□□ -1.75
PRE9YGR135W ARN1P38731 627 aa4.14□□□□□ -1.75
PRE9YGR135W MUP3P38734 546 aa4.14□□□□□ -1.75
PRE9YGR135W KRE29P40026 464 aa4.14□□□□□ -1.75
PRE9YGR135W PCL7P40186 285 aa4.14□□□□□ -1.75
PRE9YGR135W RPN11P43588 306 aaKnown RBP4.14□□□□□ -1.75
PRE9YGR135W ASN2P49090 572 aaKnown RBP4.14□□□□□ -1.75
PRE9YGR135W GPI1P53306 609 aa4.14□□□□□ -1.75
PRE9YGR135W YGR266WP53326 701 aa4.14□□□□□ -1.75
PRE9YGR135W YPR003CP53394 754 aa4.14□□□□□ -1.75
PRE9YGR135W SPC98P53540 846 aa4.14□□□□□ -1.75
PRE9YGR135W REX2P54964 269 aaKnown RBP4.14□□□□□ -1.75
PRE9YGR135W RSC9Q03124 581 aa4.14□□□□□ -1.75
PRE9YGR135W ABZ2Q03266 374 aa4.14□□□□□ -1.75
PRE9YGR135W RSN1Q03516 953 aa4.14□□□□□ -1.75
PRE9YGR135W TRS23Q03784 219 aa4.14□□□□□ -1.75
PRE9YGR135W YMR160WQ03823 816 aa4.14□□□□□ -1.75
PRE9YGR135W HSP31Q04432 237 aa4.14□□□□□ -1.75
PRE9YGR135W DPB4Q04603 196 aaKnown RBP4.14□□□□□ -1.75
PRE9YGR135W YML053CQ04978 212 aa4.14□□□□□ -1.75
PRE9YGR135W HEL2Q05580 639 aaKnown RBP4.14□□□□□ -1.75
PRE9YGR135W GMC2Q06201 188 aa4.14□□□□□ -1.75
PRE9YGR135W RRP9Q06506 573 aaKnown RBP4.14□□□□□ -1.75
PRE9YGR135W DNL4Q08387 944 aaPredicted RBP4.14□□□□□ -1.75
PRE9YGR135W TGS1Q12052 315 aa4.14□□□□□ -1.75
PRE9YGR135W VPS54Q12071 889 aa4.14□□□□□ -1.75
PRE9YGR135W BAG7Q12128 409 aa4.14□□□□□ -1.75
PRE9YGR135W YMR030W-AQ3E760 96 aa4.14□□□□□ -1.75
PRE9YGR135W ISN1Q99312 450 aa4.14□□□□□ -1.75
PRE9YGR135W TPK3P05986 398 aa4.13□□□□□ -1.75
PRE9YGR135W HIS3P06633 220 aa4.13□□□□□ -1.75
PRE9YGR135W BCY1P07278 416 aaKnown RBP4.13□□□□□ -1.75
PRE9YGR135W TRP4P07285 380 aaPredicted RBP4.13□□□□□ -1.75
PRE9YGR135W NFT1P0CE68 1218 aa4.13□□□□□ -1.75
PRE9YGR135W PHO84P25297 587 aaKnown RBP4.13□□□□□ -1.75
PRE9YGR135W GID7P25569 745 aa4.13□□□□□ -1.75
PRE9YGR135W CNE1P27825 502 aa4.13□□□□□ -1.75
PRE9YGR135W ATP7P30902 174 aa4.13□□□□□ -1.75
PRE9YGR135W HXT3P32466 567 aaKnown RBP4.13□□□□□ -1.75
PRE9YGR135W FRE1P32791 686 aa4.13□□□□□ -1.75
PRE9YGR135W COT1P32798 439 aa4.13□□□□□ -1.75
PRE9YGR135W RPC34P32910 317 aa4.13□□□□□ -1.75
PRE9YGR135W GDH2P33327 1092 aaKnown RBP4.13□□□□□ -1.75
PRE9YGR135W WBP1P33767 430 aaKnown RBP4.13□□□□□ -1.75
PRE9YGR135W LOT5P34234 306 aa4.13□□□□□ -1.75
PRE9YGR135W HCS1P34243 683 aa4.13□□□□□ -1.75
PRE9YGR135W PTC1P35182 281 aa4.13□□□□□ -1.75
PRE9YGR135W YBR241CP38142 488 aa4.13□□□□□ -1.75
PRE9YGR135W YBL028CP38202 106 aa4.13□□□□□ -1.75
PRE9YGR135W RFS1P38234 210 aaKnown RBP4.13□□□□□ -1.75
PRE9YGR135W SIF2P38262 535 aa4.13□□□□□ -1.75
PRE9YGR135W YBR242WP38331 238 aa4.13□□□□□ -1.75
PRE9YGR135W WSS1P38838 269 aa4.13□□□□□ -1.75
PRE9YGR135W EGD2P38879 174 aaKnown RBP4.13□□□□□ -1.75
PRE9YGR135W CYC2P38909 366 aa4.13□□□□□ -1.75
PRE9YGR135W YHB1P39676 399 aaKnown RBP4.13□□□□□ -1.75
PRE9YGR135W SER33P40510 469 aa4.13□□□□□ -1.75
PRE9YGR135W YIL054WP40524 105 aa4.13□□□□□ -1.75
PRE9YGR135W YJL163CP46996 555 aa4.13□□□□□ -1.75
PRE9YGR135W AZR1P50080 613 aa4.13□□□□□ -1.75
PRE9YGR135W IMD3P50095 523 aaKnown RBP4.13□□□□□ -1.75
PRE9YGR135W LIF1P53150 421 aa4.13□□□□□ -1.75
PRE9YGR135W BUD32P53323 261 aa4.13□□□□□ -1.75
PRE9YGR135W YNL033WP53964 284 aa4.13□□□□□ -1.75
PRE9YGR135W YNL019CP53975 284 aa4.13□□□□□ -1.75
PRE9YGR135W TLG1Q03322 224 aa4.13□□□□□ -1.75
PRE9YGR135W RRP17Q04031 235 aaPredicted RBP4.13□□□□□ -1.75
PRE9YGR135W RPC11Q04307 110 aaPredicted RBP4.13□□□□□ -1.75
PRE9YGR135W SPH1Q06160 661 aa4.13□□□□□ -1.75
PRE9YGR135W SYO1Q07395 620 aa4.13□□□□□ -1.75
PRE9YGR135W YEH2Q07950 538 aa4.13□□□□□ -1.75
PRE9YGR135W MUM3Q08750 479 aa4.13□□□□□ -1.75
PRE9YGR135W YPL272CQ08984 517 aa4.13□□□□□ -1.75
PRE9YGR135W MED2Q12124 431 aa4.13□□□□□ -1.75
PRE9YGR135W YLL056CQ12177 298 aa4.13□□□□□ -1.75
PRE9YGR135W RPL6BP05739 176 aaKnown RBP4.12□□□□□ -1.75
PRE9YGR135W PUT2P07275 575 aa4.12□□□□□ -1.75
PRE9YGR135W PUT4P15380 627 aa4.12□□□□□ -1.75
PRE9YGR135W AMD2P22580 549 aa4.12□□□□□ -1.75
PRE9YGR135W PPH22P23595 377 aa4.12□□□□□ -1.75
PRE9YGR135W RVS161P25343 265 aaKnown RBP4.12□□□□□ -1.75
PRE9YGR135W ADH7P25377 361 aa4.12□□□□□ -1.75
PRE9YGR135W LAC1P28496 418 aa4.12□□□□□ -1.75
PRE9YGR135W RIM1P32445 135 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms