RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C NTG2Q08214 380 aa5.42□□□□□ -1.54
SEC20YDR498C DCI1Q08558 271 aa5.42□□□□□ -1.54
SEC20YDR498C YOR114WQ12219 294 aa5.42□□□□□ -1.54
SEC20YDR498C RPS31P05759 152 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C PUT2P07275 575 aa5.41□□□□□ -1.54
SEC20YDR498C SPT15P13393 240 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C KSS1P14681 368 aa5.41□□□□□ -1.54
SEC20YDR498C DPB2P24482 689 aaPredicted RBP5.41□□□□□ -1.54
SEC20YDR498C GRR1P24814 1151 aa5.41□□□□□ -1.54
SEC20YDR498C MLF3P32047 452 aa5.41□□□□□ -1.54
SEC20YDR498C ERG1P32476 496 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C PET309P32522 965 aaPredicted RBP5.41□□□□□ -1.54
SEC20YDR498C RPN2P32565 945 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C GDH2P33327 1092 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C VPS21P36017 210 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C FMP46P36141 133 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C SCO2P38072 301 aa5.41□□□□□ -1.54
SEC20YDR498C YRO2P38079 344 aa5.41□□□□□ -1.54
SEC20YDR498C YBR139WP38109 508 aa5.41□□□□□ -1.54
SEC20YDR498C SEA4P38164 1038 aa5.41□□□□□ -1.54
SEC20YDR498C TRM7P38238 310 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C TIF34P40217 347 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C MNT3P40549 630 aa5.41□□□□□ -1.54
SEC20YDR498C ZIM17P42844 174 aa5.41□□□□□ -1.54
SEC20YDR498C GCN20P43535 752 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C BIT61P47041 543 aa5.41□□□□□ -1.54
SEC20YDR498C MNN10P50108 393 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C SLD3P53135 668 aa5.41□□□□□ -1.54
SEC20YDR498C OAZ1Q02803 292 aa5.41□□□□□ -1.54
SEC20YDR498C YMR265CQ03508 461 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C CLU1Q03690 1277 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C YML096WQ04489 525 aa5.41□□□□□ -1.54
SEC20YDR498C SPO77Q06134 477 aa5.41□□□□□ -1.54
SEC20YDR498C NDL1Q06568 189 aa5.41□□□□□ -1.54
SEC20YDR498C MCM21Q06675 368 aa5.41□□□□□ -1.54
SEC20YDR498C RRT8Q08219 342 aa5.41□□□□□ -1.54
SEC20YDR498C RTT10Q08924 1013 aa5.41□□□□□ -1.54
SEC20YDR498C NFI1Q12216 726 aa5.41□□□□□ -1.54
SEC20YDR498C YGK3Q12222 375 aaPredicted RBP5.41□□□□□ -1.54
SEC20YDR498C PST2Q12335 198 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C IES3Q12345 250 aa5.41□□□□□ -1.54
SEC20YDR498C MEX67Q99257 599 aaKnown RBP5.41□□□□□ -1.54
SEC20YDR498C MF(ALPHA)1P01149 165 aa5.4□□□□□ -1.54
SEC20YDR498C GPH1P06738 902 aaKnown RBP5.4□□□□□ -1.54
SEC20YDR498C RPS1BP23248 255 aaKnown RBP5.4□□□□□ -1.54
SEC20YDR498C PPH21P23594 369 aa5.4□□□□□ -1.54
SEC20YDR498C ADE1P27616 306 aa5.4□□□□□ -1.54
SEC20YDR498C SBA1P28707 216 aaKnown RBP5.4□□□□□ -1.54
SEC20YDR498C ITR2P30606 609 aa5.4□□□□□ -1.54
SEC20YDR498C TCD2P36101 447 aaKnown RBP5.4□□□□□ -1.54
SEC20YDR498C RRP3P38712 501 aaKnown RBP5.4□□□□□ -1.54
SEC20YDR498C BAT1P38891 393 aaKnown RBP5.4□□□□□ -1.54
SEC20YDR498C MBP1P39678 833 aa5.4□□□□□ -1.54
SEC20YDR498C LRO1P40345 661 aa5.4□□□□□ -1.54
SEC20YDR498C FAR7P43592 221 aa5.4□□□□□ -1.54
SEC20YDR498C FAA4P47912 694 aaKnown RBP5.4□□□□□ -1.54
SEC20YDR498C GPI8P49018 411 aa5.4□□□□□ -1.54
SEC20YDR498C HOS2P53096 452 aaPredicted RBP5.4□□□□□ -1.54
SEC20YDR498C ROG1P53118 685 aa5.4□□□□□ -1.54
SEC20YDR498C GOR1P53839 350 aa5.4□□□□□ -1.54
SEC20YDR498C RHO4Q00246 291 aa5.4□□□□□ -1.54
SEC20YDR498C YPL071CQ02864 156 aa5.4□□□□□ -1.54
SEC20YDR498C MTQ2Q03920 221 aaPredicted RBP5.4□□□□□ -1.54
SEC20YDR498C YMR310CQ04867 317 aaPredicted RBP5.4□□□□□ -1.54
SEC20YDR498C RSF1Q05043 376 aa5.4□□□□□ -1.54
SEC20YDR498C FMP45Q07651 309 aa5.4□□□□□ -1.54
SEC20YDR498C COS7Q07788 383 aa5.4□□□□□ -1.54
SEC20YDR498C GSH2Q08220 491 aa5.4□□□□□ -1.54
SEC20YDR498C MET17P06106 444 aa5.39□□□□□ -1.55
SEC20YDR498C HTS1P07263 546 aaKnown RBP5.39□□□□□ -1.55
SEC20YDR498C ENA1P13587 1091 aa5.39□□□□□ -1.55
SEC20YDR498C FUR1P18562 216 aaKnown RBP5.39□□□□□ -1.55
SEC20YDR498C VPS33P20795 691 aa5.39□□□□□ -1.55
SEC20YDR498C DIT1P21623 536 aa5.39□□□□□ -1.55
SEC20YDR498C CLB3P24870 427 aa5.39□□□□□ -1.55
SEC20YDR498C RER1P25560 188 aa5.39□□□□□ -1.55
SEC20YDR498C NTH1P32356 751 aa5.39□□□□□ -1.55
SEC20YDR498C VMA6P32366 345 aaKnown RBP5.39□□□□□ -1.55
SEC20YDR498C SSE2P32590 693 aaKnown RBP5.39□□□□□ -1.55
SEC20YDR498C UTP11P34247 250 aaPredicted RBP5.39□□□□□ -1.55
SEC20YDR498C APT2P36973 181 aa5.39□□□□□ -1.55
SEC20YDR498C MRPL16P38064 232 aa5.39□□□□□ -1.55
SEC20YDR498C AMN1P38285 549 aaPredicted RBP5.39□□□□□ -1.55
SEC20YDR498C IPT1P38954 527 aa5.39□□□□□ -1.55
SEC20YDR498C TAT2P38967 592 aa5.39□□□□□ -1.55
SEC20YDR498C AST2P39945 430 aaKnown RBP5.39□□□□□ -1.55
SEC20YDR498C LYS12P40495 371 aaKnown RBP5.39□□□□□ -1.55
SEC20YDR498C CIS3P47001 227 aa5.39□□□□□ -1.55
SEC20YDR498C PAC10P48363 199 aa5.39□□□□□ -1.55
SEC20YDR498C SDT1P53078 280 aa5.39□□□□□ -1.55
SEC20YDR498C YGR054WP53235 642 aaKnown RBP5.39□□□□□ -1.55
SEC20YDR498C COG5P53951 403 aa5.39□□□□□ -1.55
SEC20YDR498C ENA2Q01896 1091 aa5.39□□□□□ -1.55
SEC20YDR498C YPL107WQ02873 248 aa5.39□□□□□ -1.55
SEC20YDR498C CTL1Q03220 320 aaKnown RBP5.39□□□□□ -1.55
SEC20YDR498C TRM82Q03774 444 aa5.39□□□□□ -1.55
SEC20YDR498C RNH202Q05635 350 aa5.39□□□□□ -1.55
SEC20YDR498C ARO10Q06408 635 aa5.39□□□□□ -1.55
SEC20YDR498C CDA2Q06703 312 aa5.39□□□□□ -1.55
SEC20YDR498C RPN8Q08723 338 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms