RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	TY2A-DR1	Q12392	438 aa		5.77	□□□□□ -1.49
RPT3	YDR394W	TRM10	Q12400	293 aa		5.77	□□□□□ -1.49
RPT3	YDR394W	TY2A-OR1	Q12439	438 aa		5.77	□□□□□ -1.49
RPT3	YDR394W	YPL119C-A	Q3E751	87 aa		5.77	□□□□□ -1.49
RPT3	YDR394W	TY2A-DR3	Q99303	438 aa		5.77	□□□□□ -1.49
RPT3	YDR394W	VPS13	Q07878	3144 aa		5.77	□□□□□ -1.49
RPT3	YDR394W	TIM9	O74700	87 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	MET17	P06106	444 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	MSF1	P08425	469 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	YKR104W	P0CE69	306 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	CBS2	P14905	389 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	SYP1	P25623	870 aa	Known RBP	5.76	□□□□□ -1.49
RPT3	YDR394W	CTS1	P29029	562 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	ITR2	P30606	609 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	STE5	P32917	917 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	GGC1	P38988	300 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	YEL073C	P39974	107 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	YEL020C	P39994	560 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	SPO73	P40031	143 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	PSA1	P41940	361 aa	Known RBP	5.76	□□□□□ -1.49
RPT3	YDR394W	BIT61	P47041	543 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	DAM1	P53267	343 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	HXT15	P54854	567 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	YKR005C	Q02203	525 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	YPL107W	Q02873	248 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	APC4	Q04601	652 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	FMP45	Q07651	309 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	SFM1	Q12314	213 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	GLE1	Q12315	538 aa		5.76	□□□□□ -1.49
RPT3	YDR394W	LEU4	P06208	619 aa	Known RBP	5.75	□□□□□ -1.49
RPT3	YDR394W	LAT1	P12695	482 aa	Known RBP	5.75	□□□□□ -1.49
RPT3	YDR394W	TRX3	P25372	127 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	RHB1	P25378	209 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	GDH2	P33327	1092 aa	Known RBP	5.75	□□□□□ -1.49
RPT3	YDR394W	YKL151C	P36059	337 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	ISC1	P40015	477 aa	Known RBP	5.75	□□□□□ -1.49
RPT3	YDR394W	TPA1	P40032	644 aa	Known RBP	5.75	□□□□□ -1.49
RPT3	YDR394W	AIM20	P40451	204 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	SER33	P40510	469 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	SWP82	P43554	623 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	BIR1	P47134	954 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	COS12	P53053	380 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	PRM8	P53174	237 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	GAD1	Q04792	585 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	SPO77	Q06134	477 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	NTG2	Q08214	380 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	YOR389W	Q08912	624 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	VPS68	Q12016	184 aa		5.75	□□□□□ -1.49
RPT3	YDR394W	INH1	P01097	85 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	PUT2	P07275	575 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	RPS1B	P23248	255 aa	Known RBP	5.74	□□□□□ -1.49
RPT3	YDR394W	YCL049C	P25577	312 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	MKK2	P32491	506 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	MGM101	P32787	269 aa	Known RBP	5.74	□□□□□ -1.49
RPT3	YDR394W	DOM34	P33309	386 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	SEC66	P33754	206 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	NUF2	P33895	451 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	LOT5	P34234	306 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	FMP23	P38231	175 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	DDI1	P40087	428 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	COG3	P40094	801 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	APQ12	P40532	138 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	TY4A-J	P47023	414 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	SDT1	P53078	280 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	TWF1	P53250	332 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	AAT1	Q01802	451 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	SMA1	Q02651	245 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	OAZ1	Q02803	292 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	TRM82	Q03774	444 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	SWF1	Q04629	336 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	RNH1	Q04740	348 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	NEJ1	Q06148	342 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	MRL1	Q06815	381 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	SUL2	Q12325	893 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	PST2	Q12335	198 aa	Known RBP	5.74	□□□□□ -1.49
RPT3	YDR394W	AHC1	Q12433	566 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	MPD2	Q99316	277 aa		5.74	□□□□□ -1.49
RPT3	YDR394W	RPS17A	P02407	136 aa	Known RBP	5.73	□□□□□ -1.49
RPT3	YDR394W	RPS21A	P0C0V8	87 aa	Known RBP	5.73	□□□□□ -1.49
RPT3	YDR394W	RPS17B	P14127	136 aa	Known RBP	5.73	□□□□□ -1.49
RPT3	YDR394W	MER1	P16523	270 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	DBP3	P20447	523 aa	Known RBP	5.73	□□□□□ -1.49
RPT3	YDR394W	RRP7	P25368	297 aa	Predicted RBP	5.73	□□□□□ -1.49
RPT3	YDR394W	PET127	P32606	800 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	DEF1	P35732	738 aa	Known RBP	5.73	□□□□□ -1.49
RPT3	YDR394W	KKQ8	P36004	724 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	CBP4	P37267	147 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	SCO2	P38072	301 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	MUM2	P38236	366 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	STP2	P38704	541 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	YHR078W	P38799	552 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	PRE6	P40303	254 aa	Known RBP	5.73	□□□□□ -1.49
RPT3	YDR394W	YGR201C	P42936	225 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	PMT4	P46971	762 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	STE24	P47154	453 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	NQM1	P53228	333 aa	Predicted RBP	5.73	□□□□□ -1.49
RPT3	YDR394W	RSC9	Q03124	581 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	GPI17	Q04080	534 aa		5.73	□□□□□ -1.49
RPT3	YDR394W	RPC11	Q04307	110 aa	Predicted RBP	5.73	□□□□□ -1.49
RPT3	YDR394W	ERB1	Q04660	807 aa	Known RBP	5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms