RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	IRC15	Q02733	499 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	MRPL51	Q06090	140 aa	Predicted RBP	2.6	□□□□□ -1.99
TFB1	YDR311W	YDR262W	Q12331	272 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	HEM2	P05373	342 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	CAR2	P07991	424 aa	Known RBP	2.6	□□□□□ -1.99
TFB1	YDR311W	YLL053C	P0CD98	152 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	RPL18A	P0CX49	186 aa	Known RBP	2.6	□□□□□ -1.99
TFB1	YDR311W	RPL18B	P0CX50	186 aa	Known RBP	2.6	□□□□□ -1.99
TFB1	YDR311W	YER190C-B	P0CX94	160 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	YEL077W-A	P0CX95	160 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	YGR296C-B	P0CX96	160 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	YPL283W-B	P0CX97	160 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	YPR204C-A	P0CX98	160 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	CKI1	P20485	582 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	LSB5	P25369	354 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	TPO5	P36029	618 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	SCO2	P38072	301 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	TOM71	P38825	639 aa	Known RBP	2.6	□□□□□ -1.99
TFB1	YDR311W	LCP5	P40079	357 aa	Predicted RBP	2.6	□□□□□ -1.99
TFB1	YDR311W	MMF1	P40185	145 aa	Known RBP	2.6	□□□□□ -1.99
TFB1	YDR311W	ATM1	P40416	690 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	SIM1	P40472	476 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	GTO1	P48239	356 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	YGL242C	P53066	181 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	YNL181W	P53878	407 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	RSN1	Q03516	953 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	SMP3	Q04174	516 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	ERV41	Q04651	352 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	YMR034C	Q05131	434 aa	Predicted RBP	2.6	□□□□□ -1.99
TFB1	YDR311W	RRG8	Q06109	277 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	SRL2	Q12020	392 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	TY3A-G	Q12173	290 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	LSP1	Q12230	341 aa	Known RBP	2.6	□□□□□ -1.99
TFB1	YDR311W	CRC1	Q12289	327 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	TY3A-I	Q99219	290 aa		2.6	□□□□□ -1.99
TFB1	YDR311W	ARF1	P11076	181 aa	Known RBP	2.59	□□□□□ -1.99
TFB1	YDR311W	HOM2	P13663	365 aa	Known RBP	2.59	□□□□□ -1.99
TFB1	YDR311W	PRP16	P15938	1071 aa	Predicted RBP	2.59	□□□□□ -1.99
TFB1	YDR311W	YCL068C	P25593	260 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	YUR1	P26725	428 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	CIN8	P27895	1000 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	TOA2	P32774	122 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
TFB1	YDR311W	YBR056W	P38081	501 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	RTC2	P38279	296 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	SCC4	P40090	624 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	LYS12	P40495	371 aa	Known RBP	2.59	□□□□□ -1.99
TFB1	YDR311W	TOS3	P43637	560 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	GWT1	P47026	490 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	MPP6	P53725	186 aa	Predicted RBP	2.59	□□□□□ -1.99
TFB1	YDR311W	YNR048W	P53740	393 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	CSI1	Q04368	295 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	ORM2	Q06144	216 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	YLL007C	Q07799	665 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	AFT2	Q08957	416 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	ATX2	Q12067	313 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	YDL009C	Q12210	107 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	DCP1	Q12517	231 aa	Predicted RBP	2.59	□□□□□ -1.99
TFB1	YDR311W	YOR338W	Q99326	363 aa		2.59	□□□□□ -1.99
TFB1	YDR311W	TDH1	P00360	332 aa	Known RBP	2.58	□□□□□ -2
TFB1	YDR311W	TUB1	P09733	447 aa	Known RBP	2.58	□□□□□ -2
TFB1	YDR311W	YAR066W	P0CX18	203 aa		2.58	□□□□□ -2
TFB1	YDR311W	YHR214W	P0CX19	203 aa		2.58	□□□□□ -2
TFB1	YDR311W	EXO70	P19658	623 aa		2.58	□□□□□ -2
TFB1	YDR311W	MXR2	P25566	168 aa		2.58	□□□□□ -2
TFB1	YDR311W	SPT10	P35208	640 aa		2.58	□□□□□ -2
TFB1	YDR311W	RSM22	P36056	628 aa		2.58	□□□□□ -2
TFB1	YDR311W	AZF1	P41696	914 aa		2.58	□□□□□ -2
TFB1	YDR311W	RRN9	P53437	365 aa		2.58	□□□□□ -2
TFB1	YDR311W	BET4	Q00618	327 aa		2.58	□□□□□ -2
TFB1	YDR311W	ODC1	Q03028	310 aa		2.58	□□□□□ -2
TFB1	YDR311W	BET5	Q03630	159 aa		2.58	□□□□□ -2
TFB1	YDR311W	ECI1	Q05871	280 aa		2.58	□□□□□ -2
TFB1	YDR311W	LDB17	Q12342	491 aa		2.58	□□□□□ -2
TFB1	YDR311W	TEF1	P02994	458 aa	Known RBP	2.58	□□□□□ -2
TFB1	YDR311W	TPK3	P05986	398 aa		2.58	□□□□□ -2
TFB1	YDR311W	SSA3	P09435	649 aa	Known RBP	2.58	□□□□□ -2
TFB1	YDR311W	CLN3	P13365	580 aa		2.58	□□□□□ -2
TFB1	YDR311W	ERG1	P32476	496 aa	Known RBP	2.58	□□□□□ -2
TFB1	YDR311W	SIP2	P34164	415 aa	Known RBP	2.58	□□□□□ -2
TFB1	YDR311W	KKQ8	P36004	724 aa		2.58	□□□□□ -2
TFB1	YDR311W	DOA1	P36037	715 aa		2.58	□□□□□ -2
TFB1	YDR311W	PEX18	P38855	283 aa		2.58	□□□□□ -2
TFB1	YDR311W	CDC40	P40968	455 aa	Predicted RBP	2.58	□□□□□ -2
TFB1	YDR311W	YDL186W	P48568	277 aa		2.58	□□□□□ -2
TFB1	YDR311W	AVT4	P50944	713 aa		2.58	□□□□□ -2
TFB1	YDR311W	LSB1	P53281	241 aa		2.58	□□□□□ -2
TFB1	YDR311W	YAP7	Q08182	245 aa		2.58	□□□□□ -2
TFB1	YDR311W	ARG4	P04076	463 aa	Predicted RBP	2.57	□□□□□ -2
TFB1	YDR311W	ATP1	P07251	545 aa	Known RBP	2.57	□□□□□ -2
TFB1	YDR311W	MAS2	P11914	482 aa		2.57	□□□□□ -2
TFB1	YDR311W	SAR1	P20606	190 aa	Known RBP	2.57	□□□□□ -2
TFB1	YDR311W	UTR1	P21373	530 aa		2.57	□□□□□ -2
TFB1	YDR311W	TIP1	P27654	210 aa	Predicted RBP	2.57	□□□□□ -2
TFB1	YDR311W	GLC7	P32598	312 aa	Known RBP	2.57	□□□□□ -2
TFB1	YDR311W	COT1	P32798	439 aa		2.57	□□□□□ -2
TFB1	YDR311W	COX13	P32799	129 aa		2.57	□□□□□ -2
TFB1	YDR311W	LOS1	P33418	1100 aa	Predicted RBP	2.57	□□□□□ -2
TFB1	YDR311W	HSM3	P38348	480 aa		2.57	□□□□□ -2
TFB1	YDR311W	FET3	P38993	636 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms