RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W DPH1P40487 425 aaKnown RBP2.38□□□□□ -2.03
VPS41YDR080W RAD17P48581 401 aa2.38□□□□□ -2.03
VPS41YDR080W TRM9P49957 279 aa2.38□□□□□ -2.03
VPS41YDR080W YGR127WP53275 312 aa2.38□□□□□ -2.03
VPS41YDR080W PRP38Q00723 242 aaPredicted RBP2.38□□□□□ -2.03
VPS41YDR080W SPP2Q02521 185 aa2.38□□□□□ -2.03
VPS41YDR080W YDR209CQ03480 137 aa2.38□□□□□ -2.03
VPS41YDR080W CDC36P06100 191 aaPredicted RBP2.38□□□□□ -2.03
VPS41YDR080W YML003WP0CF16 290 aa2.38□□□□□ -2.03
VPS41YDR080W RPL42AP0CX27 106 aaKnown RBP2.38□□□□□ -2.03
VPS41YDR080W RPL42BP0CX28 106 aaKnown RBP2.38□□□□□ -2.03
VPS41YDR080W SLY1P22213 666 aa2.38□□□□□ -2.03
VPS41YDR080W CLB1P24868 471 aa2.38□□□□□ -2.03
VPS41YDR080W YCR043CP25361 127 aa2.38□□□□□ -2.03
VPS41YDR080W NDI1P32340 513 aa2.38□□□□□ -2.03
VPS41YDR080W MAL32P38158 584 aa2.38□□□□□ -2.03
VPS41YDR080W SPC97P38863 823 aa2.38□□□□□ -2.03
VPS41YDR080W PRP39P39682 629 aaKnown RBP2.38□□□□□ -2.03
VPS41YDR080W CPR6P53691 371 aaKnown RBP2.38□□□□□ -2.03
VPS41YDR080W ALF1P53904 254 aa2.38□□□□□ -2.03
VPS41YDR080W YEH1Q07804 573 aa2.38□□□□□ -2.03
VPS41YDR080W RRI1Q12468 440 aa2.38□□□□□ -2.03
VPS41YDR080W PAR32Q12515 295 aaKnown RBP2.38□□□□□ -2.03
VPS41YDR080W GLK1P17709 500 aaKnown RBP2.37□□□□□ -2.03
VPS41YDR080W BLI1P35727 113 aa2.37□□□□□ -2.03
VPS41YDR080W CAB3P36076 571 aa2.37□□□□□ -2.03
VPS41YDR080W EXO84P38261 753 aa2.37□□□□□ -2.03
VPS41YDR080W VHC1P38329 1120 aa2.37□□□□□ -2.03
VPS41YDR080W GGC1P38988 300 aa2.37□□□□□ -2.03
VPS41YDR080W LSM5P40089 93 aaKnown RBP2.37□□□□□ -2.03
VPS41YDR080W TIM13P53299 105 aa2.37□□□□□ -2.03
VPS41YDR080W GTB1Q04924 702 aa2.37□□□□□ -2.03
VPS41YDR080W GLO2Q05584 274 aa2.37□□□□□ -2.03
VPS41YDR080W RCN2Q12044 265 aa2.37□□□□□ -2.03
VPS41YDR080W TYR1P20049 452 aa2.37□□□□□ -2.03
VPS41YDR080W TAH1P25638 111 aaPredicted RBP2.37□□□□□ -2.03
VPS41YDR080W LAC1P28496 418 aa2.37□□□□□ -2.03
VPS41YDR080W MGM101P32787 269 aaKnown RBP2.37□□□□□ -2.03
VPS41YDR080W EBP2P36049 427 aaKnown RBP2.37□□□□□ -2.03
VPS41YDR080W YBR139WP38109 508 aa2.37□□□□□ -2.03
VPS41YDR080W YHR127WP38833 243 aaKnown RBP2.37□□□□□ -2.03
VPS41YDR080W SEO1P39709 593 aa2.37□□□□□ -2.03
VPS41YDR080W IMA1P53051 589 aa2.37□□□□□ -2.03
VPS41YDR080W AVL9Q12500 764 aa2.37□□□□□ -2.03
VPS41YDR080W HFA1P32874 2273 aa2.37□□□□□ -2.03
VPS41YDR080W CAR2P07991 424 aaKnown RBP2.37□□□□□ -2.03
VPS41YDR080W FUM1P08417 488 aaKnown RBP2.37□□□□□ -2.03
VPS41YDR080W YAR066WP0CX18 203 aa2.37□□□□□ -2.03
VPS41YDR080W YHR214WP0CX19 203 aa2.37□□□□□ -2.03
VPS41YDR080W RSR1P13856 272 aa2.37□□□□□ -2.03
VPS41YDR080W NCP1P16603 691 aaKnown RBP2.37□□□□□ -2.03
VPS41YDR080W ADE1P27616 306 aa2.37□□□□□ -2.03
VPS41YDR080W ARP2P32381 391 aaKnown RBP2.37□□□□□ -2.03
VPS41YDR080W PEX5P35056 612 aa2.37□□□□□ -2.03
VPS41YDR080W RSM22P36056 628 aa2.37□□□□□ -2.03
VPS41YDR080W JNM1P36224 373 aa2.37□□□□□ -2.03
VPS41YDR080W MNL1P38888 796 aa2.37□□□□□ -2.03
VPS41YDR080W STB2P46679 850 aa2.37□□□□□ -2.03
VPS41YDR080W MRPL1Q04599 285 aa2.37□□□□□ -2.03
VPS41YDR080W FRE3Q08905 711 aa2.37□□□□□ -2.03
VPS41YDR080W ATG29Q12092 213 aa2.37□□□□□ -2.03
VPS41YDR080W YOR114WQ12219 294 aa2.37□□□□□ -2.03
VPS41YDR080W RRP42Q12277 265 aaPredicted RBP2.37□□□□□ -2.03
VPS41YDR080W CHO1P08456 276 aa2.36□□□□□ -2.03
VPS41YDR080W AMD1P15274 810 aaKnown RBP2.36□□□□□ -2.03
VPS41YDR080W SPS22P25380 463 aa2.36□□□□□ -2.03
VPS41YDR080W HXT3P32466 567 aaKnown RBP2.36□□□□□ -2.03
VPS41YDR080W MRP21P38175 177 aa2.36□□□□□ -2.03
VPS41YDR080W PSY4P38193 441 aa2.36□□□□□ -2.03
VPS41YDR080W FLC2P39719 783 aa2.36□□□□□ -2.03
VPS41YDR080W PUG1P40100 303 aa2.36□□□□□ -2.03
VPS41YDR080W PHB1P40961 287 aa2.36□□□□□ -2.03
VPS41YDR080W TFG2P41896 400 aaPredicted RBP2.36□□□□□ -2.03
VPS41YDR080W IBA57P47158 497 aa2.36□□□□□ -2.03
VPS41YDR080W YNL058CP53947 316 aa2.36□□□□□ -2.03
VPS41YDR080W NUP53Q03790 475 aa2.36□□□□□ -2.03
VPS41YDR080W RMD5Q12508 421 aa2.36□□□□□ -2.03
VPS41YDR080W PRP16P15938 1071 aaPredicted RBP2.36□□□□□ -2.03
VPS41YDR080W REC107P21651 314 aa2.36□□□□□ -2.03
VPS41YDR080W YIM1P28625 365 aa2.36□□□□□ -2.03
VPS41YDR080W MEI5P32489 222 aa2.36□□□□□ -2.03
VPS41YDR080W YBL055CP34220 418 aaPredicted RBP2.36□□□□□ -2.03
VPS41YDR080W RCK2P38623 610 aa2.36□□□□□ -2.03
VPS41YDR080W YEL057CP39983 233 aa2.36□□□□□ -2.03
VPS41YDR080W NDE1P40215 560 aa2.36□□□□□ -2.03
VPS41YDR080W ICE2P40499 491 aa2.36□□□□□ -2.03
VPS41YDR080W HIS6P40545 261 aa2.36□□□□□ -2.03
VPS41YDR080W SEH1P53011 349 aaKnown RBP2.36□□□□□ -2.03
VPS41YDR080W KAP114P53067 1004 aa2.36□□□□□ -2.03
VPS41YDR080W REG1Q00816 1014 aa2.36□□□□□ -2.03
VPS41YDR080W OSH6Q02201 448 aa2.36□□□□□ -2.03
VPS41YDR080W CAC2Q04199 468 aa2.36□□□□□ -2.03
VPS41YDR080W ROY1Q04847 553 aa2.36□□□□□ -2.03
VPS41YDR080W BCH1Q05029 724 aa2.36□□□□□ -2.03
VPS41YDR080W YMR034CQ05131 434 aaPredicted RBP2.36□□□□□ -2.03
VPS41YDR080W SNA4Q07549 140 aa2.36□□□□□ -2.03
VPS41YDR080W YOR376WQ08900 122 aa2.36□□□□□ -2.03
VPS41YDR080W DAS2Q12084 232 aa2.36□□□□□ -2.03
VPS41YDR080W YRA1Q12159 226 aaKnown RBP2.36□□□□□ -2.03
VPS41YDR080W YDR018CQ12185 396 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms